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Salvatore Cosentino
Salvatore Cosentino
Research Associate at Iwasaki lab., Graduate School of Frontier Sciences, The University of Tokyo
Verified email at k.u-tokyo.ac.jp - Homepage
Title
Cited by
Cited by
Year
Identification of acquired antimicrobial resistance genes
E Zankari, H Hasman, S Cosentino, M Vestergaard, S Rasmussen, ...
Journal of antimicrobial chemotherapy 67 (11), 2640-2644, 2012
49712012
Multilocus sequence typing of total-genome-sequenced bacteria
MV Larsen, S Cosentino, S Rasmussen, C Friis, H Hasman, RL Marvig, ...
Journal of clinical microbiology 50 (4), 1355-1361, 2012
22732012
PathogenFinder-distinguishing friend from foe using bacterial whole genome sequence data
S Cosentino, M Voldby Larsen, F Møller Aarestrup, O Lund
PloS one 8 (10), e77302, 2013
5212013
Benchmarking of methods for genomic taxonomy
MV Larsen, S Cosentino, O Lukjancenko, D Saputra, S Rasmussen, ...
Journal of clinical microbiology 52 (5), 1529-1539, 2014
3402014
SonicParanoid: fast, accurate and easy orthology inference
S Cosentino, W Iwasaki
Bioinformatics 35 (1), 149-151, 2019
1142019
The Quest for Orthologs benchmark service and consensus calls in 2020
AM Altenhoff, J Garrayo-Ventas, S Cosentino, D Emms, NM Glover, ...
Nucleic acids research 48 (W1), W538-W545, 2020
442020
The Quest for Orthologs orthology benchmark service in 2022
Y Nevers, TEM Jones, D Jyothi, B Yates, M Ferret, L Portell-Silva, L Codo, ...
Nucleic Acids Research 50 (W1), W623-W632, 2022
402022
Ten Years of Collaborative Progress in the Quest for Orthologs
T Linard, Benjamin and Ebersberger, Ingo and McGlynn, Shawn E and Glover ...
Molecular Biology and Evolution 38 (8), 3033–3045, 2021
322021
The CGE tool box
MV Larsen, KG Joensen, E Zankari, J Ahrenfeldt, O Lukjancenko, ...
Applied Genomics of Foodborne Pathogens, 65-90, 2017
102017
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models
S Cosentino, S Sriswasdi, W Iwasaki
Genome Biology 25 (1), 195, 2024
32024
Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years
M Anda, S Yamanouchi, S Cosentino, M Sakamoto, M Ohkuma, ...
Nature Communications 14 (1), 7232, 2023
32023
SonicParanoid: extremely fast, accurate, and easy orthology inference
S Cosentino, W Iwasaki
Bioinformatics. https://doi. org/10.1093/bioinformatics/bty631, 2018
12018
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models
S Cosentino, W Iwasaki
bioRxiv, 2023.05. 14.540736, 2023
2023
The Good, the Bad and the Deadly: Characterisation of bacteria through DNA analysis
S Cosentino, MV Larsen, O Lund
Technical University of DenmarkDanmarks Tekniske Universitet, Department of …, 2014
2014
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