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Adam R. Rivers
Adam R. Rivers
USDA Agricultural Research Service
Verified email at usda.gov - Homepage
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Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
139502019
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725-731, 2017
15392017
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
9422018
Sizing up metatranscriptomics
MA Moran, B Satinsky, SM Gifford, H Luo, A Rivers, LK Chan, J Meng, ...
The ISME journal 7 (2), 237-243, 2013
3182013
IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses
D Paez-Espino, IMA Chen, K Palaniappan, A Ratner, K Chu, E Szeto, ...
Nucleic acids research 45 (D1), gkw1030, 2016
2152016
ITSxpress: Software to rapidly trim internally transcribed spacer sequences with quality scores for marker gene analysis
AR Rivers, KC Weber, TG Gardner, S Liu, SD Armstrong
F1000Research 7, 2018
1812018
Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill
AR Rivers, S Sharma, SG Tringe, J Martin, SB Joye, MA Moran
The ISME journal 7 (12), 2315-2329, 2013
1602013
Individual‐and assemblage‐level effects of anthropogenic sedimentation on snails in Lake Tanganyika
PB McINTYRE, E Michel, K France, A Rivers, P Hakizimana, AS Cohen
Conservation Biology 19 (1), 171-181, 2005
592005
The transcriptional response of prokaryotes to phytoplankton‐derived dissolved organic matter in seawater
S Beier, AR Rivers, MA Moran, I Obernosterer
Environmental microbiology 17 (10), 3466-3480, 2015
432015
Iron stress genes in marine Synechococcus and the development of a flow cytometric iron stress assay
AR Rivers, RW Jakuba, EA Webb
Environmental microbiology 11 (2), 382-396, 2009
422009
A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates
A Teske, V Edgcomb, AR Rivers, JR Thompson, A de Vera Gomez, ...
Extremophiles 13, 905-915, 2009
382009
Patterns and drivers of fungal community depth stratification in Sphagnum peat
LJ Lamit, KJ Romanowicz, LR Potvin, AR Rivers, K Singh, JT Lennon, ...
FEMS microbiology ecology 93 (7), fix082, 2017
342017
Nine new RNA viruses associated with the fire ant Solenopsis invicta from its native range
SM Valles, AR Rivers
Virus Genes 55 (3), 368-380, 2019
282019
Spatial Homogeneity of Bacterial Communities Associated with the Surface Mucus Layer of the Reef-Building Coral Acropora palmata
DW Kemp, AR Rivers, KM Kemp, EK Lipp, JW Porter, JP Wares
PloS one 10 (12), e0143790, 2015
242015
An Updated genome annotation for the model marine bacterium Ruegeria pomeroyi DSS-3
AR Rivers, CB Smith, MA Moran
Standards in genomic sciences 9, 1-9, 2014
242014
Intrinsic variation in the vertically transmitted core virome of the mosquito Aedes aegypti
H Coatsworth, J Bozic, J Carrillo, EA Buckner, AR Rivers, RR Dinglasan, ...
Molecular Ecology 31 (9), 2545-2561, 2022
222022
Changes in rhizosphere soil microbial communities across plant developmental stages of high and low methane emitting rice genotypes
CP Fernández-Baca, AR Rivers, W Kim, R Iwata, AM McClung, ...
Soil Biology and Biochemistry 156, 108233, 2021
212021
Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 36 (2), 196-196, 2018
212018
Phenotypic plasticity in heterotrophic marine microbial communities in continuous cultures
S Beier, AR Rivers, MA Moran, I Obernosterer
The ISME journal 9 (5), 1141-1151, 2015
212015
Experimental identification of small non-coding RNAs in the model marine bacterium Ruegeria pomeroyi DSS-3
AR Rivers, AS Burns, LK Chan, MA Moran
Frontiers in Microbiology 7, 183252, 2016
192016
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