| Dense sampling of bird diversity increases power of comparative genomics S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ... Nature 587 (7833), 252-257, 2020 | 371 | 2020 |
| Bison phylogeography constrains dispersal and viability of the Ice Free Corridor in western Canada PD Heintzman, D Froese, JW Ives, AER Soares, GD Zazula, B Letts, ... Proceedings of the National Academy of Sciences 113 (29), 8057-8063, 2016 | 188 | 2016 |
| Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe R Fregel, FL Méndez, Y Bokbot, D Martín-Socas, MD Camalich-Massieu, ... Proceedings of the National Academy of Sciences 115 (26), 6774-6779, 2018 | 166 | 2018 |
| Natural selection shaped the rise and fall of passenger pigeon genomic diversity GGR Murray, AER Soares, BJ Novak, NK Schaefer, JA Cahill, AJ Baker, ... Science 358 (6365), 951-954, 2017 | 142 | 2017 |
| Fossil and genomic evidence constrains the timing of bison arrival in North America D Froese, M Stiller, PD Heintzman, AV Reyes, GD Zazula, AER Soares, ... Proceedings of the National Academy of Sciences 114 (13), 3457-3462, 2017 | 104 | 2017 |
| Inferring species divergence times using pairwise sequential Markovian coalescent modelling and low-coverage genomic data JA Cahill, AER Soares, RE Green, B Shapiro Philosophical Transactions of the Royal Society B: Biological Sciences 371 …, 2016 | 77 | 2016 |
| Parrot genomes and the evolution of heightened longevity and cognition M Wirthlin, NCB Lima, RLM Guedes, AER Soares, LGP Almeida, ... Current Biology 28 (24), 4001-4008. e7, 2018 | 71 | 2018 |
| Genomic evidence of widespread admixture from polar bears into brown bears during the last ice age JA Cahill, PD Heintzman, K Harris, MD Teasdale, J Kapp, AER Soares, ... Molecular Biology and Evolution 35 (5), 1120-1129, 2018 | 71 | 2018 |
| Complete mitochondrial genomes of living and extinct pigeons revise the timing of the columbiform radiation AER Soares, BJ Novak, J Haile, TH Heupink, J Fjeldså, MTP Gilbert, ... BMC Evolutionary Biology 16, 1-9, 2016 | 59 | 2016 |
| Mitogenomics of the Extinct Cave Lion, Panthera spelaea (Goldfuss, 1810), Resolve its Position within the Panthera Cats R Barnett, MLZ Mendoza, AER Soares, SYW Ho, G Zazula, N Yamaguchi, ... Open Quaternary 2 (4), 1-11, 2016 | 57 | 2016 |
| On the nomenclature of the American clade of weasels (Carnivora: Mustelidae) BD Patterson, HE Ramírez-Chaves, JF Vilela, AE Rodrigues Soares, ... Journal of Animal Diversity 3 (2), 1-8, 2021 | 54 | 2021 |
| An ancient bison from the mouth of the Rauchua River (Chukotka, Russia) IV Kirillova, OG Zanina, OF Chernova, EG Lapteva, SS Trofimova, ... Quaternary Research 84 (2), 232-245, 2015 | 46 | 2015 |
| Combining fossil and molecular data to date the diversification of New World Primates CG Schrago, B Mello, AER Soares Journal of Evolutionary Biology 26 (11), 2438-2446, 2013 | 44 | 2013 |
| The influence of taxon sampling on Bayesian divergence time inference under scenarios of rate heterogeneity among lineages AER Soares, CG Schrago Journal of Theoretical Biology 364, 31-39, 2015 | 38 | 2015 |
| Demographic reconstruction from ancient DNA supports rapid extinction of the great auk JE Thomas, GR Carvalho, J Haile, NJ Rawlence, MD Martin, SYW Ho, ... Elife 8, e47509, 2019 | 36 | 2019 |
| Comparative genomics of MRSA strains from human and canine origins reveals similar virulence gene repertoire B Penna, MB Silva, AER Soares, ATR Vasconcelos, MS Ramundo, ... Scientific reports 11 (1), 4724, 2021 | 27 | 2021 |
| The Influence of Taxon Sampling and Tree Shape on Molecular Dating: An Empirical Example from Mammalian Mitochondrial Genomes AER Soares, CG Schrago Bioinformatics and Biology Insights, 129-143, 2012 | 22 | 2012 |
| Morphological and genetic identification and isotopic study of the hair of a cave lion (Panthera spelaea Goldfuss, 1810) from the Malyi Anyui River (Chukotka, Russia) OF Chernova, IV Kirillova, B Shapiro, FK Shidlovskiy, AER Soares, ... Quaternary Science Reviews 142, 61-73, 2016 | 19 | 2016 |
| Paleogenomics BS Peter D Heintzman*, Andre E R Soares*, Dan Chang Reviews in Cell Biology and Molecular Medicine 1 (3), 243–267, 2015 | 19* | 2015 |
| The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics AM Mc Cartney, G Formenti, A Mouton, D De Panis, LS Marins, HG Leitão, ... npj Biodiversity 3 (1), 28, 2024 | 18 | 2024 |
Beth ShapiroUC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa CruzVerified email at ucsc.edu
