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Mouhamadou Ba
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Overview of the bacteria biotope task at bionlp shared task 2016
L Deléger, R Bossy, E Chaix, M Ba, A Ferré, P Bessieres, C Nédellec
Proceedings of the 4th BioNLP shared task workshop, 12-22, 2016
1172016
Bacteria biotope at BioNLP open shared tasks 2019
R Bossy, L Deléger, E Chaix, M Ba, C Nédellec
5th Workshop on BioNLP Open Shared Tasks BioNLP-OST@ EMNLP-IJCNLP 2019 …, 2019
572019
Overview of the regulatory network of plant seed development (seedev) task at the bionlp shared task 2016
E Chaix, B Dubreucq, A Fatihi, D Valsamou, R Bossy, M Ba, L Deléger, ...
BioNLP Shared Task, 113, 2016
442016
Large-scale biomedical ontology matching with ServOMap
M Ba, G Diallo
IRBM 34 (1), 56-59, 2013
412013
Interoperability of corpus processing work-flow engines: the case of AlvisNLP/ML in OpenMinTeD
M Ba, R Bossy
Proceedings of the Workshop on Cross-Platform Text Mining and Natural …, 2016
162016
Omnicrobe, an open-access database of microbial habitats and phenotypes using a comprehensive text mining and data fusion approach
S Dérozier, R Bossy, L Deléger, M Ba, E Chaix, O Harlé, V Loux, ...
PloS one 18 (1), e0272473, 2023
82023
ServOMap and ServOMap-lt Results for OAEI 2012
M Ba, G Diallo
Ontology Matching, 197, 2012
72012
Improving the CONTES method for normalizing biomedical text entities with concepts from an ontology with (almost) no training data
A Ferré, M Ba, R Bossy
Genomics & informatics 17 (2), 2019
62019
Proceedings of the 4th BioNLP Shared Task Workshop
L Deléger, R Bossy, E Chaix, M Ba, A Ferré, P Bessieres, C Nédellec
62016
Handling entity normalization with no annotated corpus: weakly supervised methods based on distributional representation and ontological information
A Ferré, R Bossy, M Ba, L Deleger, T Lavergne, P Zweigenbaum, ...
Proceedings of the Twelfth Language Resources and Evaluation Conference …, 2020
52020
Florilege: a database gathering microbial phenotypes of food interest
H Falentin, E Chaix, B Dridi, P Bessieres, S Buchin, SM Deutsch, ...
4th International Conference on Microbial Diversity 2017, np, 2017
42017
OntoBiotope: une ontologie pour croiser les habitats microbiens avec les analyses de génomes.
R Bossy, E Chaix, L Deleger, A Ferré, M Ba, P Bessières, C Nédellec
Les journées Bioinformatique de l'INRA, 1, 2016
32016
D2KAB project taking off: Data to Knowledge in Agronomy and Biodiversity
S Aubin, AF Adam-Blondon, M Alaux, M Ba, S Bernard, P Bisquert, ...
14th Research Data Alliance Plenary Conference (RDA P14), Best poster award, 2019
22019
Proceedings of the 4th BioNLP shared task workshop
C Nédellec, R Bossy, JD Kim
Proceedings of the 4th BioNLP Shared Task Workshop, 2016
22016
Safe suggestions based on type convertibility to guide workflow composition
M Ba, S Ferré, M Ducassé
International Symposium on Methodologies for Intelligent Systems, 230-236, 2015
22015
Generating data converters to help compose services in bioinformatics workflows
M Ba, S Ferré, M Ducassé
International Conference on Database and Expert Systems Applications, 284-298, 2014
22014
Knowledge reposiory as entity similarity computing enabler
M Ba, G Diallo
2012 Eighth International Conference on Signal Image Technology and Internet …, 2012
22012
Guidelines for Annotation of Bacteria Biotopes
R Bossy, C Nedellec, J Jourde, M Ba
22010
MilkOligoThesaurus, a dataset of mammalian milk oligosaccharide synonyms
M Rumeau, F Fenaille, A Girard, V Loux, M Ba, C Nédellec, L Deléger, ...
Data in Brief 54, 110404, 2024
12024
Proceedings of the 5th Workshop on BioNLP Open Shared Tasks
K Jin-Dong, N Claire, B Robert, D Louise
Proceedings of the 5th Workshop on BioNLP Open Shared Tasks, 2019
12019
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Articles 1–20