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Lawrence Kelley
Lawrence Kelley
Verified email at imperial.ac.uk - Homepage
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The Phyre2 web portal for protein modeling, prediction and analysis
LA Kelley, S Mezulis, CM Yates, MN Wass, MJE Sternberg
Nature protocols 10 (6), 845-858, 2015
106972015
Protein structure prediction on the Web: a case study using the Phyre server
LA Kelley, MJE Sternberg
Nature protocols 4 (3), 363-371, 2009
52742009
Enhanced genome annotation using structural profiles in the program 3D-PSSM
LA Kelley, RM MacCallum, MJE Sternberg
Journal of molecular biology 299 (2), 501-522, 2000
18812000
3DLigandSite: predicting ligand-binding sites using similar structures
MN Wass, LA Kelley, MJE Sternberg
Nucleic acids research 38 (suppl_2), W469-W473, 2010
8072010
Enhancement of protein modeling by human intervention in applying the automatic programs 3D‐JIGSAW and 3D‐PSSM
PA Bates, LA Kelley, RM MacCallum, MJE Sternberg
Proteins: Structure, Function, and Bioinformatics 45 (S5), 39-46, 2001
7402001
An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies
LA Kelley, SP Gardner, MJ Sutcliffe
Protein Engineering, Design and Selection 9 (11), 1063-1065, 1996
5931996
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre
RM Bennett‐Lovsey, AD Herbert, MJE Sternberg, LA Kelley
Proteins: Structure, Function, and Bioinformatics 70 (3), 611-625, 2008
5442008
ePlant: visualizing and exploring multiple levels of data for hypothesis generation in plant biology
J Waese, J Fan, A Pasha, H Yu, G Fucile, R Shi, M Cumming, LA Kelley, ...
The Plant Cell 29 (8), 1806-1821, 2017
3792017
SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features
CM Yates, I Filippis, LA Kelley, MJE Sternberg
Journal of molecular biology 426 (14), 2692-2701, 2014
2652014
CAFASP‐1: Critical assessment of fully automated structure prediction methods
D Fischer, C Barret, K Bryson, A Elofsson, A Godzik, D Jones, KJ Karplus, ...
Proteins: Structure, Function, and Bioinformatics 37 (S3), 209-217, 1999
2281999
Progress in protein structure prediction: assessment of CASP3
MJE Sternberg, PA Bates, LA Kelley, RM MacCallum
Current Opinion in Structural Biology 9 (3), 368-373, 1999
1661999
Protein folding requires crowd control in a simulated cell
BR Jefferys, LA Kelley, MJE Sternberg
Journal of molecular biology 397 (5), 1329-1338, 2010
1252010
Predicting the sub-cellular location of proteins from text using support vector machines
BJ Stapley, LA Kelley, MJE Sternberg
Biocomputing 2002, 374-385, 2001
1232001
SAWTED: structure assignment with text description—enhanced detection of remote homologues with automated SWISS-PROT annotation comparisons
RM MacCallum, LA Kelley, MJE Sternberg
Bioinformatics 16 (2), 125-129, 2000
762000
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains
TE Lewis, I Sillitoe, A Andreeva, TL Blundell, DWA Buchan, C Chothia, ...
Nucleic acids research 41 (D1), D499-D507, 2012
722012
An automated approach for defining core atoms and domains in an ensemble of NMR-derived protein structures.
LA Kelley, SP Gardner, MJ Sutcliffe
Protein engineering 10 (6), 737-741, 1997
691997
High–quality protein backbone reconstruction from alpha carbons using Gaussian mixture models
BL Moore, LA Kelley, J Barber, JW Murray, JT MacDonald
Journal of computational chemistry 34 (22), 1881-1889, 2013
652013
OLDERADO: On‐line database of ensemble representatives and domains
LA Kelley, MJ Sutcliffe
Protein science 6 (12), 2628-2630, 1997
641997
Functional significance of mutations in the Snf2 domain of ATRX
M Mitson, LA Kelley, MJE Sternberg, DR Higgs, RJ Gibbons
Human molecular genetics 20 (13), 2603-2610, 2011
602011
ePlant and the 3D data display initiative: integrative systems biology on the world wide web
G Fucile, D Di Biase, H Nahal, G La, S Khodabandeh, Y Chen, K Easley, ...
PLoS One 6 (1), e15237, 2011
602011
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