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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing PM Shih, D Wu, A Latifi, SD Axen, DP Fewer, E Talla, A Calteau, F Cai, ... Proceedings of the National Academy of Sciences 110 (3), 1053-1058, 2013 | 869 | 2013 |
MicroScope—an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data D Vallenet, E Belda, A Calteau, S Cruveiller, S Engelen, A Lajus, ... Nucleic acids research 41 (D1), D636-D647, 2013 | 420 | 2013 |
MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis D Vallenet, A Calteau, M Dubois, P Amours, A Bazin, M Beuvin, L Burlot, ... Nucleic acids research 48 (D1), D579-D589, 2020 | 262 | 2020 |
A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal R Kristiansen, HTT Nguyen, AM Saunders, JL Nielsen, R Wimmer, VQ Le, ... The ISME journal 7 (3), 543-554, 2013 | 262 | 2013 |
Azospirillum Genomes Reveal Transition of Bacteria from Aquatic to Terrestrial Environments F Wisniewski-Dyé, K Borziak, G Khalsa-Moyers, G Alexandre, ... PLoS genetics 7 (12), e1002430, 2011 | 258 | 2011 |
Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence B Remenant, B Coupat-Goutaland, A Guidot, G Cellier, E Wicker, C Allen, ... BMC genomics 11, 1-16, 2010 | 257 | 2010 |
MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes D Vallenet, A Calteau, S Cruveiller, M Gachet, A Lajus, A Josso, J Mercier, ... Nucleic acids research 45 (D1), D517-D528, 2017 | 214 | 2017 |
Metabolic diversity among main microorganisms inside an arsenic-rich ecosystem revealed by meta-and proteo-genomics PN Bertin, A Heinrich-Salmeron, E Pelletier, F Goulhen-Chollet, ... The ISME journal 5 (11), 1735-1747, 2011 | 185 | 2011 |
Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria A Calteau, DP Fewer, A Latifi, T Coursin, T Laurent, J Jokela, CA Kerfeld, ... BMC genomics 15, 1-14, 2014 | 184 | 2014 |
PPanGGOLiN: depicting microbial diversity via a partitioned pangenome graph G Gautreau, A Bazin, M Gachet, R Planel, L Burlot, M Dubois, A Perrin, ... PLoS computational biology 16 (3), e1007732, 2020 | 169 | 2020 |
A Tribute to Disorder in the Genome of the Bloom-Forming Freshwater Cyanobacterium Microcystis aeruginosa JF Humbert, V Barbe, A Latifi, M Gugger, A Calteau, T Coursin, A Lajus, ... PloS one 8 (8), e70747, 2013 | 164 | 2013 |
Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria E Ficko-Blean, A Préchoux, F Thomas, T Rochat, R Larocque, Y Zhu, ... Nature communications 8 (1), 1685, 2017 | 159 | 2017 |
Populations, not clones, are the unit of vibrio pathogenesis in naturally infected oysters A Lemire, D Goudenège, T Versigny, B Petton, A Calteau, Y Labreuche, ... The ISME journal 9 (7), 1523-1531, 2015 | 157 | 2015 |
Parallel Evolution of a Type IV Secretion System in Radiating Lineages of the Host-Restricted Bacterial Pathogen Bartonella P Engel, W Salzburger, M Liesch, CC Chang, S Maruyama, C Lanz, ... PLoS genetics 7 (2), e1001296, 2011 | 131 | 2011 |
Genome mining expands the chemical diversity of the cyanobactin family to include highly modified linear peptides N Leikoski, L Liu, J Jokela, M Wahlsten, M Gugger, A Calteau, P Permi, ... Chemistry & biology 20 (8), 1033-1043, 2013 | 123 | 2013 |
A community resource for paired genomic and metabolomic data mining MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ... Nature Chemical Biology 17 (4), 363-368, 2021 | 117 | 2021 |
Run-Off Replication of Host-Adaptability Genes Is Associated with Gene Transfer Agents in the Genome of Mouse-Infecting Bartonella grahamii EC Berglund, AC Frank, A Calteau, O Vinnere Pettersson, F Granberg, ... PLoS genetics 5 (7), e1000546, 2009 | 109 | 2009 |
Horizontal gene transfer regulation in bacteria as a “spandrel” of DNA repair mechanisms S Fall, A Mercier, F Bertolla, A Calteau, L Gueguen, G Perriere, TM Vogel, ... PLoS One 2 (10), e1055, 2007 | 98 | 2007 |
Mutation rate and genome reduction in endosymbiotic and free-living bacteria GAB Marais, A Calteau, O Tenaillon Genetica 134 (2), 205-210, 2008 | 95 | 2008 |