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Thomas Desvignes
Thomas Desvignes
Institute of Neuroscience, University of Oregon
Verified email at uoregon.edu - Homepage
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Cited by
Year
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
I Braasch, AR Gehrke, JJ Smith, K Kawasaki, T Manousaki, J Pasquier, ...
Nature genetics 48 (4), 427-437, 2016
5762016
miRNA nomenclature: a view incorporating genetic origins, biosynthetic pathways, and sequence variants
T Desvignes, P Batzel, E Berezikov, K Eilbeck, JT Eppig, MS McAndrews, ...
Trends in Genetics 31 (11), 613-626, 2015
2302015
Nme protein family evolutionary history, a vertebrate perspective
T Desvignes, P Pontarotti, C Fauvel, J Bobe
BMC evolutionary biology 9 (1), 256, 2009
1302009
A new model army: Emerging fish models to study the genomics of vertebrate Evo‐Devo
I Braasch, SM Peterson, T Desvignes, BM McCluskey, P Batzel, ...
Journal of Experimental Zoology Part B: Molecular and Developmental …, 2015
1212015
Antarctic blackfin icefish genome reveals adaptations to extreme environments
BM Kim, A Amores, S Kang, DH Ahn, JH Kim, IC Kim, JH Lee, SG Lee, ...
Nature ecology & evolution 3 (3), 469-478, 2019
1042019
Gonadal soma controls ovarian follicle proliferation through Gsdf in zebrafish
YL Yan, T Desvignes, R Bremiller, C Wilson, D Dillon, S High, B Draper, ...
Developmental Dynamics 246 (11), 925-945, 2017
842017
Evolution of the miR199-214 cluster and vertebrate skeletal development
T Desvignes, A Contreras, JH Postlethwait
RNA biology 11 (4), 281-294, 2014
652014
RADSex: A computational workflow to study sex determination using restriction site‐associated DNA sequencing data
R Feron, Q Pan, M Wen, B Imarazene, E Jouanno, J Anderson, A Herpin, ...
Molecular Ecology Resources 21 (5), 1715-1731, 2021
602021
A Hormone That Lost Its Receptor: Anti-Müllerian Hormone (AMH) in Zebrafish Gonad Development and Sex Determination
YL Yan, P Batzel, T Titus, J Sydes, T Desvignes, R BreMiller, B Draper, ...
Genetics 213 (2), 529-553, 2019
572019
The advantage of channeling nucleotides for very processive functions
D Zala, U Schlattner, T Desvignes, J Bobe, A Roux, P Chavrier, M Boissan
F1000Research 6, 1-22, 2017
522017
The nme gene family in zebrafish oogenesis and early development
T Desvignes, C Fauvel, J Bobe
Naunyn-Schmiedeberg's archives of pharmacology 384 (4-5), 439-449, 2011
482011
miRNA analysis with Prost! reveals evolutionary conservation of organ-enriched expression and post-transcriptional modifications in three-spined stickleback and zebrafish
T Desvignes, P Batzel, J Sydes, BF Eames, JH Postlethwait
Scientific Reports 9 (1), 3913, 2019
462019
Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API
T Desvignes, P Loher, K Eilbeck, J Ma, G Urgese, B Fromm, J Sydes, ...
Bioinformatics 36 (3), 698-703, 2020
402020
Nme gene family evolutionary history reveals pre-metazoan origins and high conservation between humans and the sea anemone, Nematostella vectensis
T Desvignes, P Pontarotti, J Bobe
PLoS One 5 (11), e15506, 2010
392010
Maternally Inherited npm2 mRNA Is Crucial for Egg Developmental Competence in Zebrafish
A Bouleau, T Desvignes, JM Traverso, T Nguyen, F Chesnel, C Fauvel, ...
Biology of reproduction 91 (2), 43, 1-9, 2014
362014
Adaptation of proteins to the cold in Antarctic fish: A role for Methionine?
C Berthelot, J Clarke, T Desvignes, H William Detrich III, P Flicek, LS Peck, ...
Genome biology and evolution 11 (1), 220-231, 2019
332019
Genome structures resolve the early diversification of teleost fishes
E Parey, A Louis, J Montfort, O Bouchez, C Roques, C Iampietro, J Lluch, ...
Science 379 (6632), 572-575, 2023
322023
Expanding the annotation of zebrafish microRNAs based on small RNA sequencing
T Desvignes, MJ Beam, P Batzel, J Sydes, JH Postlethwait
Gene 546 (2), 386-389, 2014
322014
Genomics of cold adaptations in the Antarctic notothenioid fish radiation
I Bista, JMD Wood, T Desvignes, SA McCarthy, M Matschiner, Z Ning, ...
Nature Communications 14 (1), 3412, 2023
292023
Evolution of caudal fin ray development and caudal fin hypural diastema complex in spotted gar, teleosts, and other neopterygian fishes
T Desvignes, A Carey, JH Postlethwait
Developmental Dynamics, 2018
292018
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