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Markus D Herrmann, MD, PhD
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Data-analysis strategies for image-based cell profiling
JC Caicedo, S Cooper, F Heigwer, S Warchal, P Qiu, C Molnar, ...
Nature methods 14 (9), 849-863, 2017
6892017
Multiplexed protein maps link subcellular organization to cellular states
G Gut, MD Herrmann, L Pelkmans
Science 361 (6401), eaar7042, 2018
4352018
Implementing the DICOM standard for digital pathology
MD Herrmann, DA Clunie, A Fedorov, SW Doyle, S Pieper, V Klepeis, ...
Journal of pathology informatics 9 (1), 37, 2018
1322018
NCI imaging data commons
A Fedorov, WJR Longabaugh, D Pot, DA Clunie, S Pieper, HJWL Aerts, ...
Cancer research 81 (16), 4188-4193, 2021
612021
Computational pathology in 2030: a Delphi study forecasting the role of AI in pathology within the next decade
MA Berbís, DS McClintock, A Bychkov, J Van der Laak, L Pantanowitz, ...
EBioMedicine 88, 2023
582023
MITI Minimum Information guidelines for highly multiplexed tissue images
D Schapiro, C Yapp, A Sokolov, SM Reynolds, YA Chen, D Sudar, Y Xie, ...
Nature Methods 19 (3), 262-267, 2022
532022
Computer vision for image-based transcriptomics
T Stoeger, N Battich, MD Herrmann, Y Yakimovich, L Pelkmans
Methods 85, 44-53, 2015
452015
A regulatory science initiative to harmonize and standardize digital pathology and machine learning processes to speed up clinical innovation to patients
HD Marble, R Huang, SN Dudgeon, A Lowe, MD Herrmann, S Blakely, ...
Journal of Pathology Informatics 11 (1), 22, 2020
352020
A nuclear circularity-based classifier for diagnostic distinction of desmoplastic from spindle cell melanoma in digitized histological images
M Schöchlin, SE Weissinger, AR Brandes, M Herrmann, P Möller, ...
Journal of pathology informatics 5 (1), 40, 2014
342014
A pathologist-annotated dataset for validating artificial intelligence: a project description and pilot study
SN Dudgeon, S Wen, MG Hanna, R Gupta, M Amgad, M Sheth, H Marble, ...
Journal of Pathology Informatics 12 (1), 45, 2021
302021
Highdicom: A python library for standardized encoding of image annotations and machine learning model outputs in pathology and radiology
CP Bridge, C Gorman, S Pieper, SW Doyle, JK Lennerz, ...
Journal of digital imaging 35 (6), 1719-1737, 2022
182022
Interoperable slide microscopy viewer and annotation tool for imaging data science and computational pathology
C Gorman, D Punzo, I Octaviano, S Pieper, WJR Longabaugh, DA Clunie, ...
Nature Communications 14 (1), 1572, 2023
162023
Quantitative Imaging Informatics for Cancer Research
A Fedorov, R Beichel, J Kalpathy-Cramer, D Clunie, M Onken, ...
JCO Clinical Cancer Informatics 4, 444-453, 2020
162020
Isolated Whipple's endocarditis: an underestimated diagnosis that requires molecular analysis of surgical material
MD Herrmann, A Neumayr, A Essig, J Spiess, J Merk, P Möller, A Liebold, ...
The Annals of thoracic surgery 98 (1), e1-e3, 2014
152014
Integrating the health-care enterprise pathology and laboratory medicine guideline for digital pathology interoperability
RC Dash, N Jones, R Merrick, G Haroske, J Harrison, C Sayers, ...
Journal of Pathology Informatics 12 (1), 16, 2021
142021
Current clinical applications and potential perspective of micro-computed tomography in cardiovascular imaging: A systematic scoping review
AS Papazoglou, E Karagiannidis, DV Moysidis, G Sofidis, A Bompoti, ...
Hellenic Journal of Cardiology 62 (6), 399-407, 2021
132021
National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence
A Fedorov, WJR Longabaugh, D Pot, DA Clunie, SD Pieper, DL Gibbs, ...
RadioGraphics 43 (12), e230180, 2023
122023
Transitory dasatinib-resistant states in KITmut t (8; 21) acute myeloid leukemia cells correlate with altered KIT expression
MD Herrmann, JK Lennerz, L Bullinger, S Bartholomae, K Holzmann, ...
Experimental hematology 42 (2), 90-100, 2014
122014
Volumetric Imaging of Lung Tissue at Micrometer Resolution: Clinical Applications of Micro-CT for the Diagnosis of Pulmonary Diseases
A Bompoti, AS Papazoglou, DV Moysidis, N Otountzidis, E Karagiannidis, ...
Diagnostics 11 (11), 2075, 2021
62021
KIT mutations in primary mediastinal B-cell lymphoma
PD Nagel, A Stenzinger, FM Feld, MD Herrmann, S Brüderlein, TFE Barth, ...
Blood cancer journal 4 (8), e241-e241, 2014
62014
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Articles 1–20