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Magdy Alabady, PhD
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Widespread natural variation of DNA methylation within angiosperms
CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim, Q Li, NA Rohr, ...
Genome biology 17, 1-19, 2016
5262016
Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)
TC Glenn, RA Nilsen, TJ Kieran, JG Sanders, NJ Bayona-Vásquez, ...
PeerJ 7, e7755, 2019
3012019
Genetic mapping of new cotton fiber loci using EST-derived microsatellites in an interspecific recombinant inbred line cotton population
YH Park, MS Alabady, M Ulloa, B Sickler, TA Wilkins, J Yu, DM Stelly, ...
Molecular Genetics and Genomics 274, 428-441, 2005
2522005
Adapterama I: universal stubs and primers for thousands of dual-indexed Illumina libraries (iTru & iNext)
TC Glenn, RA Nilsen, TJ Kieran, JW Finger Jr, TW Pierson, KE Bentley, ...
BioRxiv, 049114, 2016
1192016
A kinesin-14 motor activates neocentromeres to promote meiotic drive in maize
RK Dawe, EG Lowry, JI Gent, MC Stitzer, KW Swentowsky, DM Higgins, ...
Cell 173 (4), 839-850. e18, 2018
1182018
Genomic and small RNA sequencing of Miscanthus × giganteusshows the utility of sorghum as a reference genome sequence for Andropogoneae grasses
K Swaminathan, MS Alabady, K Varala, E De Paoli, I Ho, DS Rokhsar, ...
Genome biology 11, 1-18, 2010
1162010
Gapless assembly of maize chromosomes using long-read technologies
J Liu, AS Seetharam, K Chougule, S Ou, KW Swentowsky, JI Gent, ...
Genome Biology 21, 1-17, 2020
1072020
Histone H3 Variant Regulates RNA Polymerase II Transcription Termination and Dual Strand Transcription of siRNA Loci in Trypanosoma brucei
D Reynolds, BT Hofmeister, L Cliffe, M Alabady, TN Siegel, RJ Schmitz, ...
PLoS genetics 12 (1), e1005758, 2016
642016
Exploiting genome variation to improve next-generation sequencing data analysis and genome editing efficiency in Populus tremula × alba 717-1B4
LJ Xue, MS Alabady, M Mohebbi, CJ Tsai
Tree Genetics & Genomes 11, 1-8, 2015
542015
Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext). PeerJ 7: e7755
TC Glenn, RA Nilsen, TJ Kieran, JG Sanders, NJ Bayona-Vásquez, ...
512019
Characterizing changes in soil microbiome abundance and diversity due to different cover crop techniques
CH Wang, L Wu, Z Wang, MS Alabady, D Parson, Z Molumo, ...
PLoS One 15 (5), e0232453, 2020
442020
Gene-rich islands for fiber development in the cotton genome
Z Xu, RJ Kohel, G Song, J Cho, M Alabady, J Yu, P Koo, J Chu, S Yu, ...
Genomics 92 (3), 173-183, 2008
442008
A detailed gene expression study of the Miscanthusgenus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes
A Barling, K Swaminathan, T Mitros, BT James, J Morris, O Ngamboma, ...
BMC genomics 14, 1-16, 2013
412013
Abundance and multilocus sequence analysis of Vibrio bacteria associated with diseased elkhorn coral (Acropora palmata) of the Florida Keys
KM Kemp, JR Westrich, MS Alabady, ML Edwards, EK Lipp
Applied and environmental microbiology 84 (2), e01035-17, 2018
362018
Effects of the probiotic Lactobacillus animalis in murine Mycobacterium avium subspecies paratuberculosis infection
E Karunasena, PC Kurkure, RD Lackey, KW McMahon, EP Kiernan, ...
BMC microbiology 13, 1-13, 2013
302013
Double feature selection and cluster analyses in mining of microarray data from cotton
MS Alabady, E Youn, TA Wilkins
BMC genomics 9, 1-11, 2008
242008
Serum albumin alters the expression of iron-controlled genes in Pseudomonas aeruginosa
C Kruczek, M Wachtel, MS Alabady, PR Payton, JA Colmer-Hamood, ...
Microbiology 158 (2), 353-367, 2012
232012
Development of transcriptomic markers for population analysis using restriction site associated RNA sequencing (RARseq)
MS Alabady, WL Rogers, RL Malmberg
Plos one 10 (8), e0134855, 2015
102015
The species coalescent indicates possible bat and pangolin origins of the COVID-19 pandemic
J Yang, M Skaro, J Chen, D Zhan, L Lyu, S Gay, A Kandeil, MA Ali, ...
Scientific Reports 13 (1), 5571, 2023
92023
Genotypic Characterization of Pseudomonas aeruginosa Isolated from Human and Animal Sources in Egypt
KM Osman, MS Alabady, N Ata, NA Ezzeldin, MAK Aly
Zoonoses and public health 57 (5), 329-338, 2010
92010
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Articles 1–20