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Parantu K Shah, PhD
Parantu K Shah, PhD
Associate Scientific Director, EMD Serono R&D, Inc.
Verified email at dfci.harvard.edu
Title
Cited by
Cited by
Year
Applications of machine learning in drug discovery and development
J Vamathevan, D Clark, P Czodrowski, I Dunham, E Ferran, G Lee, B Li, ...
Nature reviews Drug discovery 18 (6), 463-477, 2019
19822019
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ...
Science 330 (6012), 1787-1797, 2010
10852010
Unlocking the secrets of the genome
SE Celniker, LAL Dillon, MB Gerstein, KC Gunsalus, S Henikoff, ...
Nature 459 (7249), 927-930, 2009
9722009
A cis-regulatory map of the Drosophila genome
N Nègre, CD Brown, L Ma, CA Bristow, SW Miller, U Wagner, ...
Nature 471 (7339), 527-531, 2011
5762011
A Small Molecule Inhibitor of Ubiquitin-Specific Protease-7 Induces Apoptosis in Multiple Myeloma Cells and Overcomes Bortezomib Resistance
D Chauhan, Z Tian, B Nicholson, KG Kumar, B Zhou, R Carrasco, ...
Cancer Cell 22 (3), 345-358, 2012
5712012
A Comprehensive Map of Insulator Elements for the Drosophila Genome
N Nègre, CD Brown, PK Shah, P Kheradpour, CA Morrison, JG Henikoff, ...
PLoS genetics 6 (1), e1000814, 2010
3732010
Information extraction from full text scientific articles: where are the keywords?
PK Shah, C Perez-Iratxeta, P Bork, MA Andrade
BMC bioinformatics 4, 1-9, 2003
2612003
The SMARCA2/4 ATPase domain surpasses the bromodomain as a drug target in SWI/SNF-mutant cancers: insights from cDNA rescue and PFI-3 inhibitor studies
B Vangamudi, TA Paul, PK Shah, M Kost-Alimova, L Nottebaum, X Shi, ...
Cancer research 75 (18), 3865-3878, 2015
2412015
Genomic analysis of estrogen cascade reveals histone variant H2A. Z associated with breast cancer progression
S Hua, CB Kallen, R Dhar, MT Baquero, CE Mason, BA Russell, PK Shah, ...
Molecular systems biology 4 (1), 188, 2008
2162008
Avelumab in patients with previously treated metastatic Merkel cell carcinoma: long-term data and biomarker analyses from the single-arm phase 2 JAVELIN Merkel 200 trial
SP D'Angelo, S Bhatia, AS Brohl, O Hamid, JM Mehnert, P Terheyden, ...
Journal for immunotherapy of cancer 8 (1), 2020
1782020
Computational characterization of multiple Gag-like human proteins
M Campillos, T Doerks, PK Shah, P Bork
Trends in Genetics 22 (11), 585-589, 2006
1622006
PASBio: predicate-argument structures for event extraction in molecular biology
T Wattarujeekrit, PK Shah, N Collier
BMC bioinformatics 5, 1-20, 2004
1382004
In vivo functional platform targeting patient-derived xenografts identifies WDR5-Myc association as a critical determinant of pancreatic cancer
A Carugo, G Genovese, S Seth, L Nezi, JL Rose, D Bossi, A Cicalese, ...
Cell reports 16 (1), 133-147, 2016
1352016
First-line avelumab in a cohort of 116 patients with metastatic Merkel cell carcinoma (JAVELIN Merkel 200): primary and biomarker analyses of a phase II study
SP D'Angelo, C Lebbé, L Mortier, AS Brohl, N Fazio, JJ Grob, N Prinzi, ...
Journal for immunotherapy of cancer 9 (7), 2021
882021
Integrative analysis of gene and miRNA expression profiles with transcription factor–miRNA feed-forward loops identifies regulators in human cancers
Z Yan, PK Shah, SB Amin, MK Samur, N Huang, X Wang, V Misra, H Ji, ...
Nucleic acids research 40 (17), e135-e135, 2012
882012
Genetic events that limit the efficacy of MEK and RTK inhibitor therapies in a mouse model of KRAS-driven pancreatic cancer
P Pettazzoni, A Viale, P Shah, A Carugo, H Ying, H Wang, G Genovese, ...
Cancer research 75 (6), 1091-1101, 2015
862015
Gene expression profile alone is inadequate in predicting complete response in multiple myeloma
SB Amin, WK Yip, S Minvielle, A Broyl, Y Li, B Hanlon, D Swanson, ...
Leukemia 28 (11), 2229-2234, 2014
842014
Targeting poly (ADP-ribose) polymerase and the c-myb–regulated DNA damage response pathway in castration-resistant prostate cancer
L Li, W Chang, G Yang, C Ren, S Park, T Karantanos, S Karanika, J Wang, ...
Science signaling 7 (326), ra47-ra47, 2014
812014
TRIM28 and interacting KRAB-ZNFs control self-renewal of human pluripotent stem cells through epigenetic repression of pro-differentiation genes
U Oleksiewicz, M Gładych, AT Raman, H Heyn, E Mereu, ...
Stem cell reports 9 (6), 2065-2080, 2017
802017
Determinants of antigenicity and specificity in immune response for protein sequences
Y Wang, W Wu, NN Negre, KP White, C Li, PK Shah
BMC bioinformatics 12, 1-13, 2011
792011
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