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James DR Knight
James DR Knight
Cultivarium
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Title
Cited by
Cited by
Year
High-density proximity mapping reveals the subcellular organization of mRNA-associated granules and bodies
JY Youn, WH Dunham, SJ Hong, JDR Knight, M Bashkurov, GI Chen, ...
Molecular cell 69 (3), 517-532. e11, 2018
7082018
A dynamic protein interaction landscape of the human centrosome-cilium interface
GD Gupta, É Coyaud, J Gonçalves, BA Mojarad, Y Liu, Q Wu, ...
Cell 163 (6), 1484-1499, 2015
5522015
Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions
AL Couzens, JDR Knight, MJ Kean, G Teo, A Weiss, WH Dunham, ZY Lin, ...
Science signaling 6 (302), rs15-rs15, 2013
4922013
A proximity-dependent biotinylation map of a human cell
CD Go, JDR Knight, A Rajasekharan, B Rathod, GG Hesketh, KT Abe, ...
Nature 595 (7865), 120-124, 2021
396*2021
Properties of Stress Granule and P-Body Proteomes
JY Youn, BJA Dyakov, J Zhang, JDR Knight, RM Vernon, JD Forman-Kay, ...
Molecular Cell 76 (2), 286-294, 2019
3732019
Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes
JP Lambert, M Tucholska, C Go, JDR Knight, AC Gingras
Journal of proteomics 118, 81-94, 2015
3092015
ProHits-viz: a suite of web tools for visualizing interaction proteomics data
JDR Knight, H Choi, GD Gupta, L Pelletier, B Raught, AI Nesvizhskii, ...
Nature methods 14 (7), 645-646, 2017
1942017
The myogenic kinome: protein kinases critical to mammalian skeletal myogenesis
JDR Knight, R Kothary
Skeletal muscle 1, 1-18, 2011
1872011
Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains
JP Lambert, S Picaud, T Fujisawa, H Hou, P Savitsky, L Uusküla-Reimand, ...
Molecular cell 73 (3), 621-638. e17, 2019
1662019
MSPLIT-DIA: sensitive peptide identification for data-independent acquisition
J Wang, M Tucholska, JDR Knight, JP Lambert, S Tate, B Larsen, ...
Nature methods 12 (12), 1106-1108, 2015
1422015
Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators
N St-Denis, GD Gupta, ZY Lin, B Gonzalez-Badillo, AO Veri, JDR Knight, ...
Cell Reports 17 (9), 2488-2501, 2016
1072016
CCM-3/STRIPAK promotes seamless tube extension through endocytic recycling
B Lant, B Yu, M Goudreault, D Holmyard, JDR Knight, P Xu, L Zhao, ...
Nature communications 6 (1), 1-13, 2015
1012015
A SARS-CoV-2–host proximity interactome
P Samavarchi-Tehrani, H Abdouni, JDR Knight, A Astori, R Samson, ...
BioRxiv, 2020.09. 03.282103, 2020
952020
Biochemical, proteomic, structural, and thermodynamic characterizations of integrin-linked kinase (ILK) CROSS-VALIDATION OF THE PSEUDOKINASE
K Fukuda, JDR Knight, G Piszczek, R Kothary, J Qin
Journal of Biological Chemistry 286 (24), 21886-21895, 2011
872011
Data Independent Acquisition analysis in ProHits 4.0
G Liu, JDR Knight, JP Zhang, CC Tsou, J Wang, JP Lambert, B Larsen, ...
Journal of proteomics 149, 64-68, 2016
822016
Conservation, variability and the modeling of active protein kinases
JDR Knight, B Qian, D Baker, R Kothary
PLoS One 2 (10), e982, 2007
792007
The GATOR–Rag GTPase pathway inhibits mTORC1 activation by lysosome-derived amino acids
GG Hesketh, F Papazotos, J Pawling, D Rajendran, JDR Knight, ...
Science 370 (6514), 351-356, 2020
662020
Heart of glass anchors Rasip1 at endothelial cell-cell junctions to support vascular integrity
BJ de Kreuk, AR Gingras, JDR Knight, JJ Liu, AC Gingras, MH Ginsberg
Elife 5, e11394, 2016
612016
The role of conserved water molecules in the catalytic domain of protein kinases
JDR Knight, D Hamelberg, JA McCammon, R Kothary
Proteins: Structure, Function, and Bioinformatics 76 (3), 527-535, 2009
612009
A novel whole-cell lysate kinase assay identifies substrates of the p38 MAPK in differentiating myoblasts
JDR Knight, R Tian, REC Lee, F Wang, A Beauvais, H Zou, LA Megeney, ...
Skeletal muscle 2, 1-12, 2012
602012
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Articles 1–20