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Jilong Li
Jilong Li
Pillar Biosciences
Verified email at pillar-biosciences.com
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Year
Highly sensitive spatial transcriptomics at near-cellular resolution with Slide-seqV2
EZMFC Robert R. Stickels, Evan Murray, Pawan Kumar, Jilong Li, Jamie L ...
Nature Biotechnology 39, 313–319, 2021
6662021
Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment.
et al. M. Lensink, S. Velankar
Proteins 84 (Suppl 1), 323–348, 2016
166*2016
Proteomic Quantification and Site-Mapping of S-Nitrosylated Proteins Using Isobaric iodoTMT Reagents
Z Qu, F Meng, RD Bomgarden, RI Viner, J Li, JC Rogers, J Cheng, ...
Journal of proteome research 13 (7), 3200-3211, 2014
1302014
WeFold: a coopetition for protein structure prediction
GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ...
Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014
742014
Transcriptomic analysis identifies gene networks regulated by estrogen receptor α (ERα) and ERβ that control distinct effects of different botanical estrogens
P Gong, Z Madak-Erdogan, J Li, J Cheng, CM Greenlief, W Helferich, ...
Nuclear receptor signaling 12 (1), nrs. 12001, 2014
722014
Large-Scale Model Quality Assessment for Improving Protein Tertiary Structure Prediction
R Cao, D Bhattacharya, B Adhikari, J Li, J Cheng
Bioinformatics 31 (12), i116-i123, 2015
652015
Dosage compensation and inverse effects in triple X metafemales of Drosophila
L Sun, AF Johnson, RC Donohue, J Li, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (18), 7383-7388, 2013
592013
Male-specific lethal complex in Drosophila counteracts histone acetylation and does not mediate dosage compensation
L Sun, HR Fernandez, RC Donohue, J Li, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (9), E808-E817, 2013
492013
The MULTICOM toolbox for protein structure prediction
J Cheng, J Li, Z Wang, J Eickholt, X Deng
BMC bioinformatics 13, 1-12, 2012
472012
Differential effect of aneuploidy on the X chromosome and genes with sex-biased expression in Drosophila
L Sun, AF Johnson, J Li, AS Lambdin, J Cheng, JA Birchler
Proceedings of the National Academy of Sciences 110 (41), 16514-16519, 2013
452013
NitroDIGE analysis reveals inhibition of protein S-nitrosylation by epigallocatechin gallates in lipopolysaccharide-stimulated microglial cells
Z Qu, F Meng, H Zhou, J Li, Q Wang, F Wei, J Cheng, CM Greenlief, ...
Journal of neuroinflammation 11, 1-13, 2014
322014
Messenger RNA profile analysis deciphers new Esrrb responsive genes in prostate cancer cells
Y Lu, J Li, J Cheng, D Lubahn
BMC Molecular Biology 16 (1), 2015
312015
Proteomic Analysis of the Effects of Aged Garlic Extract and its FruArg Component on Lipopolysaccharide-induced Neuroinflammatory Response in Microglial Cells
H Zhou, Z Qu, J Li
PLoS ONE 9, e113531, 2014
292014
Designing and benchmarking the MULTICOM protein structure prediction system
J Li, X Deng, J Eickholt, J Cheng
BMC structural biology 13, 1-14, 2013
292013
What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment
S Cui, T Ji, J Li, J Cheng, J Qiu
Stat. Appl. Genet. Mol. Biol 15 (2), 87-105, 2016
282016
Genes targeted by the HedgeHog-signaling pathway can be regulated by Estrogen related receptor
Y Lu, J Li, J Cheng, D Lubahn
BMC Molecular Biology 16 (1), 2015
262015
A Large-Scale Conformation Sampling and Evaluation Server for Protein Tertiary Structure Prediction and its Assessment in CASP11
J Li, R Cao, J Cheng
BMC bioinformatics 16, 337, 2015
252015
Massive integration of diverse protein quality assessment methods to improve template based modeling in CASP11
R Cao, D Bhattacharya, B Adhikari, J Li, J Cheng
Proteins, 2015
252015
Reconstruction of Metabolic Pathways by Combining Probabilistic Graphical Model-based and Knowledge-based Methods
Q Qi, J Li, J Cheng
BMC Proceeding 8 (S6), S5, 2014
242014
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ...
Scientific reports 8 (1), 9939, 2018
232018
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