A comparative evaluation of the generalised predictive ability of eight machine learning algorithms across ten clinical metabolomics data sets for binary classification KM Mendez, SN Reinke, DI Broadhurst Metabolomics 15, 1-15, 2019 | 167 | 2019 |
The application of artificial neural networks in metabolomics: a historical perspective KM Mendez, DI Broadhurst, SN Reinke Metabolomics 15 (11), 142, 2019 | 103 | 2019 |
Toward collaborative open data science in metabolomics using Jupyter Notebooks and cloud computing KM Mendez, L Pritchard, SN Reinke, DI Broadhurst Metabolomics 15, 1-16, 2019 | 83 | 2019 |
Metabolomic profiling reveals extensive adrenal suppression due to inhaled corticosteroid therapy in asthma P Kachroo, ID Stewart, RS Kelly, M Stav, K Mendez, A Dahlin, ... Nature medicine 28 (4), 814-822, 2022 | 68 | 2022 |
Migrating from partial least squares discriminant analysis to artificial neural networks: a comparison of functionally equivalent visualisation and feature contribution tools … KM Mendez, DI Broadhurst, SN Reinke Metabolomics 16 (2), 17, 2020 | 51 | 2020 |
Metabo-endotypes of asthma reveal differences in lung function: discovery and validation in two TOPMed cohorts RS Kelly, KM Mendez, M Huang, BD Hobbs, CB Clish, R Gerszten, ... American Journal of Respiratory and Critical Care Medicine 205 (3), 288-299, 2022 | 25 | 2022 |
Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients J Diray-Arce, S Fourati, ND Jayavelu, R Patel, C Maguire, AC Chang, ... Cell Reports Medicine 4 (6), 2023 | 22 | 2023 |
A meta-analysis of immune-cell fractions at high resolution reveals novel associations with common phenotypes and health outcomes Q Luo, VB Dwaraka, Q Chen, H Tong, T Zhu, K Seale, JM Raffaele, ... Genome Medicine 15 (1), 59, 2023 | 19 | 2023 |
OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records Q Chen, VB Dwaraka, N Carreras-Gallo, K Mendez, Y Chen, S Begum, ... bioRxiv, 2023 | 14 | 2023 |
Whole-genome sequencing analysis of human metabolome in multi-ethnic populations EV Feofanova, MR Brown, T Alkis, AM Manuel, X Li, UA Tahir, Z Li, ... nature communications 14 (1), 3111, 2023 | 14 | 2023 |
Association of human plasma metabolomics with delayed dark adaptation in age-related macular degeneration KM Mendez, J Kim, I Laíns, A Nigalye, R Katz, S Pundik, IK Kim, L Liang, ... Metabolites 11 (3), 183, 2021 | 12 | 2021 |
An epidemiological introduction to human metabolomic investigations AD Joshi, A Rahnavard, P Kachroo, KM Mendez, W Lawrence, ... Trends in Endocrinology & Metabolism, 2023 | 9 | 2023 |
Plasma metabolomic profiles associated with three-year progression of age-related macular degeneration I Lains, K Mendez, A Nigalye, R Katz, VP Douglas, RS Kelly, IK Kim, ... Metabolites 12 (1), 32, 2022 | 9 | 2022 |
A genome-wide association study of mass spectrometry proteomics using the Seer Proteograph platform K Suhre, Q Chen, A Halama, K Mendez, A Dahlin, N Stephan, G Thareja, ... bioRxiv, 2024 | 4 | 2024 |
Area under the dark adaptation curve as a reliable alternate measure of dark adaptation response S Pundlik, A Nigalye, I Laíns, KM Mendez, R Katz, J Kim, IK Kim, JB Miller, ... British Journal of Ophthalmology 106 (10), 1450-1456, 2022 | 4 | 2022 |
Sphingolipid classes and the interrelationship with pediatric asthma and asthma risk factors Y Chen, A Checa, P Zhang, M Huang, RS Kelly, M Kim, YCS Chen, ... Allergy 79 (2), 404-418, 2024 | 3 | 2024 |
Plasma Metabolites Associated with OCT Features of Age-Related Macular Degeneration I Lains, X Han, J Gil, J Providencia, A Nigalye, R Alvarez, VP Douglas, ... Ophthalmology Science 4 (1), 100357, 2024 | 3* | 2024 |
Urinary mass spectrometry profiles in age-related macular degeneration I Lains, KM Mendez, JQ Gil, JB Miller, RS Kelly, P Barreto, IK Kim, ... Journal of Clinical Medicine 11 (4), 940, 2022 | 3 | 2022 |
Metabolite signatures associated with microRNA miR-143-3p serve as drivers of poor lung function trajectories in childhood asthma KM Mendez, S Begum, A Tiwari, R Sharma, Q Chen, RS Kelly, N Prince, ... EBioMedicine 102, 2024 | 2 | 2024 |
Phenotypically driven subgroups of ASD display distinct metabolomic profiles N Prince, SH Chu, Y Chen, KM Mendez, E Hanson, LA Green-Snyder, ... Brain, Behavior, and Immunity 111, 21-29, 2023 | 2 | 2023 |