Ashok Rajaraman
Cited by
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Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes
DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ...
Science 347 (6217), 1258522, 2015
ANGES: reconstructing ANcestral GEnomeS maps
BR Jones, A Rajaraman, E Tannier, C Chauve
Bioinformatics 28 (18), 2388-2390, 2012
FPSAC: fast phylogenetic scaffolding of ancient contigs
A Rajaraman, E Tannier, C Chauve
Bioinformatics 29 (23), 2987-2994, 2013
Hypergraph covering problems motivated by genome assembly questions
C Chauve, M Patterson, A Rajaraman
Combinatorial Algorithms: 24th International Workshop, IWOCA 2013, Rouen …, 2013
Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction
A Rajaraman, J Ma
BMC bioinformatics 17, 201-212, 2016
Improving personalized prediction of cancer prognoses with clonal evolution models
Y Tao, A Rajaraman, X Cui, Z Cui, J Eaton, H Kim, J Ma, R Schwartz
bioRxiv, 761510, 2019
Toward recovering allele-specific cancer genome graphs
A Rajaraman, J Ma
Journal of Computational Biology 25 (7), 624-636, 2018
Algorithms and complexity results for genome mapping problems
A Rajaraman, JPP Zanetti, J Maňuch, C Chauve
IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (2 …, 2016
Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material
A Rajaraman, C Chauve, Y Ponty
Bioinformatics Research and Applications: 11th International Symposium …, 2015
Assessing the contribution of tumor mutational phenotypes to cancer progression risk
Y Tao, A Rajaraman, X Cui, Z Cui, H Chen, Y Zhao, J Eaton, H Kim, J Ma, ...
PLoS computational biology 17 (3), e1008777, 2021
Variants of the Consecutive Ones Property: Algorithms, Computational Complexity and Applications to Genomics
A Rajaraman
Department of Mathematics, Simon Fraser University, 2015
The genome of the medieval Black Death agent
A Rajaraman, E Tannier, C Chauve
arXiv preprint arXiv:1307.7642, 2013
The genome of the medieval Black Death agent
E Tannier, C Chauve, A Rajaraman
Inference of ancestral protein-protein interactions using methods from algebraic statistics
A Rajaraman
Simon Fraser University, 2011
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