Ashok Rajaraman

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Cedric ChauveProfessor of Mathematics, Simon Fraser UniversityVerified email at sfu.ca
Eric TannierInria, IXXI, ENS Lyon, Univ LyonVerified email at inria.fr
Jian MaRay and Stephanie Lane Professor of Computational Biology, Carnegie Mellon UniversityVerified email at cs.cmu.edu
Bradley R. JonesDepartment of Mathematics, Simon Fraser UniversityVerified email at cfenet.ubc.ca
Russell SchwartzProfessor of Biological Sciences and Computational Biology, Carnegie Mellon UniversityVerified email at andrew.cmu.edu
Yifeng TaoQuantitative Researcher at Citadel SecuritiesVerified email at cs.cmu.edu
Jesse EatonFreenome - Senior Machine Learning ScientistVerified email at freenome.com
Hannah KimGraduate Student, Temple UniversityVerified email at temple.edu
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
Jan ManuchComputer Science, University of British ColumbiaVerified email at cs.ubc.ca
João Paulo Pereira ZanettiRoyal Netherlands Meteorological Institute (KNMI)Verified email at knmi.nl
Haoran ChenSt. Jude Children's Research HospitalVerified email at stjude.org
Yann PontyResearch director at CNRS & Ecole PolytechniqueVerified email at lix.polytechnique.fr

Ashok Rajaraman

Accenture Inc.

Verified email at accenture.com - Homepage

Design and Analysis of Algorithms Statistical inference Probabilistic models Computational Complexity


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Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ... Science 347 (6217), 1258522, 2015	628	2015
ANGES: reconstructing ANcestral GEnomeS maps BR Jones, A Rajaraman, E Tannier, C Chauve Bioinformatics 28 (18), 2388-2390, 2012	85	2012
FPSAC: fast phylogenetic scaffolding of ancient contigs A Rajaraman, E Tannier, C Chauve Bioinformatics 29 (23), 2987-2994, 2013	41	2013
Hypergraph covering problems motivated by genome assembly questions C Chauve, M Patterson, A Rajaraman Combinatorial Algorithms: 24th International Workshop, IWOCA 2013, Rouen …, 2013	13	2013
Reconstructing ancestral gene orders with duplications guided by synteny level genome reconstruction A Rajaraman, J Ma BMC bioinformatics 17, 201-212, 2016	9	2016
Improving personalized prediction of cancer prognoses with clonal evolution models Y Tao, A Rajaraman, X Cui, Z Cui, J Eaton, H Kim, J Ma, R Schwartz bioRxiv, 761510, 2019	7	2019
Toward recovering Allele-specific cancer genome graphs A Rajaraman, J Ma Journal of Computational Biology 25 (7), 624-636, 2018	5	2018
Assessing the contribution of tumor mutational phenotypes to cancer progression risk Y Tao, A Rajaraman, X Cui, Z Cui, H Chen, Y Zhao, J Eaton, H Kim, J Ma, ... PLoS computational biology 17 (3), e1008777, 2021	4	2021
Algorithms and complexity results for genome mapping problems A Rajaraman, JPP Zanetti, J Maňuch, C Chauve IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (2 …, 2016	4	2016
Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material A Rajaraman, C Chauve, Y Ponty Bioinformatics Research and Applications: 11th International Symposium …, 2015	2	2015
Variants of the Consecutive Ones Property: Algorithms, Computational Complexity and Applications to Genomics A Rajaraman Department of Mathematics, Simon Fraser University, 2015	1	2015
The genome of the medieval Black Death agent A Rajaraman, E Tannier, C Chauve arXiv preprint arXiv:1307.7642, 2013	1	2013
The genome of the medieval Black Death agent E Tannier, C Chauve, A Rajaraman		2013
Inference of ancestral protein-protein interactions using methods from algebraic statistics A Rajaraman Simon Fraser University, 2011		2011

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