| Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of molecular biology 414 (2), 289-302, 2011 | 159 | 2011 |
| CPPred: coding potential prediction based on the global description of RNA sequence X Tong, S Liu Nucleic acids research 47 (8), e43-e43, 2019 | 120 | 2019 |
| Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions R Moretti, SJ Fleishman, R Agius, M Torchala, PA Bates, PL Kastritis, ... Proteins: Structure, Function, and Bioinformatics 81 (11), 1980-1987, 2013 | 115 | 2013 |
| Nonnatural protein–protein interaction-pair design by key residues grafting S Liu, S Liu, X Zhu, H Liang, A Cao, Z Chang, L Lai Proceedings of the National Academy of Sciences 104 (13), 5330, 2007 | 108 | 2007 |
| RBPPred: predicting RNA-binding proteins from sequence using SVM X Zhang, S Liu Bioinformatics 33 (6), 854-862, 2017 | 97 | 2017 |
| Virtual screening of novel noncovalent inhibitors for SARS-CoV 3C-like proteinase Z Liu, C Huang, K Fan, P Wei, H Chen, S Liu, J Pei, L Shi, B Li, K Yang, ... Journal of chemical information and modeling 45 (1), 10-17, 2005 | 93 | 2005 |
| Dockground protein–protein docking decoy set S Liu, Y Gao, IA Vakser Bioinformatics 24 (22), 2634-2635, 2008 | 78 | 2008 |
| A novel protocol for three-dimensional structure prediction of RNA-protein complexes Y Huang, S Liu, D Guo, L Li, Y Xiao Scientific Reports, 2013 | 74 | 2013 |
| DECK: Distance and environment-dependent, coarse-grained, knowledge-based potentials for protein-protein docking S Liu, IA Vakser BMC bioinformatics 12, 1-7, 2011 | 66 | 2011 |
| Deep-RBPPred: Predicting RNA binding proteins in the proteome scale based on deep learning J Zheng, X Zhang, X Zhao, X Tong, X Hong, J Xie, S Liu Scientific reports 8 (1), 15264, 2018 | 55 | 2018 |
| A novel antiviral lncRNA, EDAL, shields a T309 O-GlcNAcylation site to promote EZH2 lysosomal degradation B Sui, D Chen, W Liu, Q Wu, B Tian, Y Li, J Hou, S Liu, J Xie, H Jiang, ... Genome biology 21, 1-36, 2020 | 48 | 2020 |
| ASPDock: protein-protein docking algorithm using atomic solvation parameters model L Li, D Guo, Y Huang, S Liu, Y Xiao BMC bioinformatics 12, 1-9, 2011 | 48 | 2011 |
| Quaternary structure, substrate selectivity and inhibitor design for SARS 3C-like proteinase L Lai, X Han, H Chen, P Wei, C Huang, S Liu, K Fan, L Zhou, Z Liu, J Pei, ... Current pharmaceutical design 12 (35), 4555-4564, 2006 | 45 | 2006 |
| Template-based modeling of protein-RNA interactions J Zheng, PJ Kundrotas, IA Vakser, S Liu PLoS computational biology 12 (9), e1005120, 2016 | 37 | 2016 |
| A combinatorial score to distinguish biological and nonbiological protein–protein interfaces S Liu, Q Li, L Lai Proteins: Structure, Function, and Bioinformatics 64 (1), 68-78, 2006 | 34 | 2006 |
| The dataset for protein–RNA binding affinity X Yang, H Li, Y Huang, S Liu Protein Science 22 (12), 1808-1811, 2013 | 33 | 2013 |
| Small GTPases SAR1A and SAR1B regulate the trafficking of the cardiac sodium channel Nav1. 5 Z Wang, G Yu, Y Liu, S Liu, M Aridor, Y Huang, Y Hu, L Wang, S Li, ... Biochimica et Biophysica Acta (BBA)-Molecular Basis of Disease 1864 (11 …, 2018 | 27 | 2018 |
| Novel EDA p.Ile260Ser Mutation Linked to Non-syndromic Hypodontia Y Yang, L Luo, J Xu, P Zhu, W Xue, J Wang, W Li, M Wang, K Cheng, ... Journal of dental research 92 (6), 500-506, 2013 | 26 | 2013 |
| Break CDK2/Cyclin E1 interface allosterically with small peptides H Chen, Y Zhao, H Li, D Zhang, Y Huang, Q Shen, R Van Duyne, ... PLoS One 9 (10), e109154, 2014 | 23 | 2014 |
| P3DOCK: a protein–RNA docking webserver based on template-based and template-free docking J Zheng, X Hong, J Xie, X Tong, S Liu Bioinformatics 36 (1), 96-103, 2020 | 22 | 2020 |
Jinfang ZhengUniversity of Nebraska at LincolnVerified email at unl.edu
