Pierre Nicolas
Pierre Nicolas
INRAE Jouy-en-Josas / Université Paris-Saclay
Verified email at - Homepage
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Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis
P Nicolas, U Mäder, E Dervyn, T Rochat, A Leduc, N Pigeonneau, ...
Science 335 (6072), 1103-1106, 2012
The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution
M Van De Guchte, S Penaud, C Grimaldi, V Barbe, K Bryson, P Nicolas, ...
Proceedings of the National Academy of Sciences 103 (24), 9274-9279, 2006
Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism
JM Buescher, W Liebermeister, M Jules, M Uhr, J Muntel, E Botella, ...
Science 335 (6072), 1099-1103, 2012
Complete genome sequence of the fish pathogen Flavobacterium psychrophilum
E Duchaud, M Boussaha, V Loux, JF Bernardet, C Michel, B Kerouault, ...
Nature biotechnology 25 (7), 763-769, 2007
Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions
U Mäder, P Nicolas, M Depke, J Pané-Farré, M Debarbouille, ...
PLoS genetics 12 (4), e1005962, 2016
The WalKR system controls major staphylococcal virulence genes and is involved in triggering the host inflammatory response
A Delauné, S Dubrac, C Blanchet, O Poupel, U Mäder, A Hiron, A Leduc, ...
Infection and immunity 80 (10), 3438-3453, 2012
Large-scale reduction of the Bacillus subtilis genome: consequences for the transcriptional network, resource allocation, and metabolism
DR Reuß, J Altenbuchner, U Mäder, H Rath, T Ischebeck, PK Sappa, ...
Genome research 27 (2), 289-299, 2017
Three Essential Ribonucleases—RNase Y, J1, and III—Control the Abundance of a Majority of Bacillus subtilis mRNAs
S Durand, L Gilet, P Bessičres, P Nicolas, C Condon
PLoS genetics 8 (3), e1002520, 2012
Rgg proteins associated with internalized small hydrophobic peptides: a new quorum‐sensing mechanism in streptococci
B Fleuchot, C Gitton, A Guillot, J Vidic, P Nicolas, C Besset, L Fontaine, ...
Molecular microbiology 80 (4), 1102-1119, 2011
Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram‐positive bacteria
A Barinov, V Loux, A Hammani, P Nicolas, P Langella, D Ehrlich, ...
Proteomics 9 (1), 61-73, 2009
Mining Bacillus subtilis chromosome heterogeneities using hidden Markov models
P Nicolas, L Bize, F Muri, M Hoebeke, F Rodolphe, SD Ehrlich, B Prum, ...
Nucleic Acids Research 30 (6), 1418-1426, 2002
Population Structure of the Fish-Pathogenic Bacterium Flavobacterium psychrophilum
P Nicolas, S Mondot, G Achaz, C Bouchenot, JF Bernardet, E Duchaud
Applied and environmental microbiology 74 (12), 3702-3709, 2008
AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system
K Bryson, V Loux, R Bossy, P Nicolas, S Chaillou, M Van De Guchte, ...
Nucleic acids research 34 (12), 3533-3545, 2006
Analysis and modelling of effects of leaf rust and Septoria tritici blotch on wheat growth
C Robert, MO Bancal, P Nicolas, C Lannou, B Ney
Journal of Experimental Botany 55 (399), 1079-1094, 2004
Genome-wide identification of genes directly regulated by the pleiotropic transcription factor Spx in Bacillus subtilis
T Rochat, P Nicolas, O Delumeau, A Rabatinová, J Korelusova, A Leduc, ...
Nucleic acids research 40 (19), 9571-9583, 2012
Deciphering the molecular basis of wine yeast fermentation traits using a combined genetic and genomic approach
C Ambroset, M Petit, C Brion, I Sanchez, P Delobel, C Guérin, H Chiapello, ...
G3: Genes| Genomes| Genetics 1 (4), 263-281, 2011
A genome-wide survey of short coding sequences in streptococci
M Ibrahim, P Nicolas, P Bessičres, A Bolotin, V Monnet, R Gardan
Microbiology 153 (11), 3631-3644, 2007
The stem cell population of the human colon crypt: analysis via methylation patterns
P Nicolas, KM Kim, D Shibata, S Tavaré
PLoS computational biology 3 (3), e28, 2007
Multilocus sequence analysis of the marine bacterial genus Tenacibaculum suggests parallel evolution of fish pathogenicity and endemic colonization of aquaculture systems
C Habib, A Houel, A Lunazzi, JF Bernardet, AB Olsen, H Nilsen, ...
Applied and environmental microbiology 80 (17), 5503-5514, 2014
A Nitric Oxide Regulated Small RNA Controls Expression of Genes Involved in Redox Homeostasis in Bacillus subtilis
S Durand, F Braun, E Lioliou, C Romilly, AC Helfer, L Kuhn, N Quittot, ...
PLoS genetics 11 (2), e1004957, 2015
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