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Lorenzo Dematté
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A high quality draft consensus sequence of the genome of a heterozygous grapevine variety
R Velasco, A Zharkikh, M Troggio, DA Cartwright, A Cestaro, D Pruss, ...
PloS one 2 (12), e1326, 2007
12882007
Genome-wide transcriptional analysis of grapevine berry ripening reveals a set of genes similarly modulated during three seasons and the occurrence of an oxidative burst at …
S Pilati, M Perazzolli, A Malossini, A Cestaro, L Demattè, P Fontana, ...
BMC genomics 8, 1-22, 2007
2872007
GPU computing for systems biology
L Dematté, D Prandi
Briefings in bioinformatics 11 (3), 323-333, 2010
1702010
The BlenX language: a tutorial
L Dematté, C Priami, A Romanel
International School on Formal Methods for the Design of Computer …, 2008
1112008
The Beta Workbench: a computational tool to study the dynamics of biological systems
L Dematté, C Priami, A Romanel
Briefings in Bioinformatics 9 (5), 437-449, 2008
1052008
On parallel stochastic simulation of diffusive systems
L Dematté, T Mazza
Computational Methods in Systems Biology: 6th International Conference CMSB …, 2008
552008
Modelling and simulation of biological processes in BlenX
L Dematté, C Priami, A Romanel
ACM SIGMETRICS Performance Evaluation Review 35 (4), 32-39, 2008
422008
Evolving BlenX programs to simulate the evolution of biological networks
L Dematté, C Priami, A Romanel, O Soyer
Theoretical Computer Science 408 (1), 83-96, 2008
282008
Smoldyn on graphics processing units: massively parallel Brownian dynamics simulations
L Dematte
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (3), 655-667, 2011
242011
The beta workbench
A Romanel, L Dematté, C Priami
The Microsoft Research-University of Trento Centre for Computational and …, 2007
232007
BetaWB: modelling and simulating biological processes.
L Dematté, C Priami, A Romanel
SCSC, 777-784, 2007
182007
Programming biology in BlenX
L Dematté, R Larcher, A Palmisano, C Priami, A Romanel
Systems Biology for Signaling Networks, 777-820, 2010
162010
Stochastic simulation of reaction-diffusion systems
P Lecca, L Dematté
International Journal of Computer and Systems Engineering 2 (3), 83-103, 2008
162008
Parallel particle-based reaction diffusion: a GPU implementation
L Dematté
2010 Ninth International Workshop on Parallel and Distributed Methods in …, 2010
122010
Stochastic simulation of the spatio-temporal dynamics of reaction-diffusion systems: the case for the bicoid gradient
P Lecca, AEC Ihekwaba, L Dematté, C Priami
Journal of Integrative Bioinformatics (JIB) 7 (1), 140-171, 2010
122010
A formal and integrated framework to simulate evolution of biological pathways
L Dematté, C Priami, A Romanel, O Soyer
Computational Methods in Systems Biology: International Conference CMSB 2007 …, 2007
122007
Modeling and simulating reaction-diffusion systems with state-dependent diffusion coefficients
P Lecca, L Dematté, C Priami
International Journal of Chemical and Molecular Engineering 2 (8), 210-230, 2008
112008
Stochastic modelling of diffusion systems. video image simulation of tubulin diffusion in cytoplasm: a case study
P Lecca, L Dematté, M Lecca, C Priami
Computational Vision and Medical Image Processing: VipIMAGE 2009, 145, 2009
52009
GORetriever: a novel Gene Ontology annotation tool based on semantic similarity for knowledge discovery in database
P Fontana, L Demattè, A Cestaro, C Segala, R Velasco, S Toppo
Proc. Bioninformatics Italian Society. Bologna, Italy, 28-29, 2006
42006
The first genome sequence of an elite grapevine cultivar (Pinot noir; Vitis vinifera L.): coping with a highly heterozygous genome
R Velasco, C Moser, A Zharkikh, M Troggio, SK Bhatnagar, M Pindo, ...
COST 858: Grape genome bioinformatics, 1, 2006
42006
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