Chengxi Ye
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Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
DW Yu, Y Ji, BC Emerson, X Wang, C Ye, C Yang, Z Ding
Methods in Ecology and Evolution 3 (4), 613-623, 2012
DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies
C Ye, CM Hill, S Wu, J Ruan, ZS Ma
Scientific Reports 6, Article number: 31900, 2016
The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution
JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath, HJ Parker, ...
Nature genetics 50 (2), 270-277, 2018
Exploiting sparseness in de novo genome assembly
C Ye, ZS Ma, CH Cannon, M Pop, WY Douglas
BMC bioinformatics 13 (6), 1-8, 2012
Developing indicators of economic value and biodiversity loss for rubber plantations in Xishuangbanna, southwest China: A case study from Menglun township
ZF Yi, CH Cannon, J Chen, CX Ye, RD Swetnam
Ecological Indicators 36, 788-797, 2014
Unsupervised Learning of Dense Optical Flow, Depth and Egomotion with Event-Based Sensors
C Ye, A Mitrokhin, C Fermüller, JA Yorke, Y Aloimonos
2020 IEEE/RSJ International Conference on Intelligent Robots and Systems …, 2020
EV-IMO: Motion segmentation dataset and learning pipeline for event cameras
A Mitrokhin, C Ye, C Fermüller, Y Aloimonos, T Delbruck
2019 IEEE/RSJ International Conference on Intelligent Robots and Systems …, 2019
Dissecting the decision making process of scatter‐hoarding rodents
B Wang, CX Ye, CH Cannon, J Chen
Oikos 122 (7), 1027-1034, 2013
From asymmetrical to balanced genomic diversification during rediploidization: Subgenomic evolution in allotetraploid fish
J Luo, J Chai, Y Wen, M Tao, G Lin, X Liu, L Ren, Z Chen, S Wu, S Li, ...
Science advances 6 (22), eaaz7677, 2020
Network analysis suggests a potentially ‘evil’alliance of opportunistic pathogens inhibited by a cooperative network in human milk bacterial communities
ZS Ma, Q Guan, C Ye, C Zhang, JA Foster, LJ Forney
Scientific Reports 5 (1), 1-6, 2015
What can i do around here? deep functional scene understanding for cognitive robots
C Ye, Y Yang, R Mao, C Fermüller, Y Aloimonos
2017 IEEE International Conference on Robotics and Automation (ICRA), 4604-4611, 2017
Network Deconvolution
C Ye, M Evanusa, H He, A Mitrokhin, T Goldstein, JA Yorke, C Fermüller, ...
arXiv preprint arXiv:1905.11926, 2019
Sparc: a sparsity-based consensus algorithm for long erroneous sequencing reads
C Ye, ZS Ma
PeerJ 4, e2016, 2016
Hybrid assembly of ultra-long Nanopore reads augmented with 10x-Genomics contigs: Demonstrated with a human genome
ZS Ma, L Li, C Ye, M Peng, YP Zhang
Genomics 111 (6), 1896-1901, 2019
Speech emotion classification on a Riemannian manifold
C Ye, J Liu, C Chen, M Song, J Bu
Pacific-Rim Conference on Multimedia, 61-69, 2008
LightNet: A Versatile, Standalone Matlab-based Environment for Deep Learning
C Ye, C Zhao, Y Yang, C Fermuller, Y Aloimonos
Proceedings of the 2016 ACM on Multimedia Conference, 1156-1159, 2016
BlindCall: ultra-fast base-calling of high-throughput sequencing data by blind deconvolution
C Ye, C Hsiao, H Corrada Bravo
Bioinformatics 30 (9), 1214-1219, 2014
On the Importance of Consistency in Training Deep Neural Networks
C Ye, Y Yang, C Fermuller, Y Aloimonos
arXiv preprint arXiv:1708.00631, 2017
Sparse norm filtering
C Ye, D Tao, M Song, DW Jacobs, M Wu
arXiv preprint arXiv:1305.3971, 2013
Evenly Cascaded Convolutional Networks
C Ye, C Devaraj, M Maynord, C Fermüller, Y Aloimonos
2018 IEEE International Conference on Big Data (Big Data), 4640-4647, 2018
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