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Tom O. Delmont
Tom O. Delmont
CNRS - Genoscope - TARA anvi-Oceans
Verified email at genoscope.cns.fr
Title
Cited by
Cited by
Year
Anvi’o: an advanced analysis and visualization platform for ‘omics data
AM Eren, ÖC Esen, C Quince, JH Vineis, HG Morrison, ML Sogin, ...
PeerJ 3, e1319, 2015
1515*2015
VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
J Guo, B Bolduc, AA Zayed, A Varsani, G Dominguez-Huerta, TO Delmont, ...
Microbiome 9, 1-13, 2021
5242021
Nitrogen-fixing populations of Planctomycetes and Proteobacteria are abundant in surface ocean metagenomes
TO Delmont, C Quince, A Shaiber, ÖC Esen, STM Lee, MS Rappé, ...
Nature microbiology 3 (7), 804-813, 2018
4832018
Community-led, integrated, reproducible multi-omics with anvi’o
AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ...
Nature microbiology 6 (1), 3-6, 2021
4222021
Accessing the soil metagenome for studies of microbial diversity
TO Delmont, P Robe, S Cecillon, IM Clark, F Constancias, P Simonet, ...
Applied and environmental microbiology 77 (4), 1315-1324, 2011
3732011
Linking pangenomes and metagenomes: the Prochlorococcus metapangenome
TO Delmont, AM Eren
PeerJ 6, e4320, 2018
3352018
Large-scale metagenomic-based study of antibiotic resistance in the environment
J Nesme, S Cécillon, TO Delmont, JM Monier, TM Vogel, P Simonet
Current biology 24 (10), 1096-1100, 2014
3092014
Structure, fluctuation and magnitude of a natural grassland soil metagenome
TO Delmont, E Prestat, KP Keegan, M Faubladier, P Robe, IM Clark, ...
The ISME journal 6 (9), 1677-1687, 2012
2512012
Phytoplankton–bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge
EM Bertrand, JP McCrow, A Moustafa, H Zheng, JB McQuaid, TO Delmont, ...
Proceedings of the National Academy of Sciences 112 (32), 9938-9943, 2015
2252015
Metagenomic comparison of direct and indirect soil DNA extraction approaches
TO Delmont, P Robe, I Clark, P Simonet, TM Vogel
Journal of microbiological methods 86 (3), 397-400, 2011
1812011
DESMAN: a new tool for de novo extraction of strains from metagenomes
C Quince, TO Delmont, S Raguideau, J Alneberg, AE Darling, G Collins, ...
Genome biology 18, 1-22, 2017
1792017
Biosynthetic potential of the global ocean microbiome
L Paoli, HJ Ruscheweyh, CC Forneris, F Hubrich, S Kautsar, A Bhushan, ...
Nature 607 (7917), 111-118, 2022
1612022
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ...
Genome biology 21, 1-35, 2020
1432020
Peripartum antibiotics promote gut dysbiosis, loss of immune tolerance, and inflammatory bowel disease in genetically prone offspring
J Miyoshi, AM Bobe, S Miyoshi, Y Huang, N Hubert, TO Delmont, AM Eren, ...
Cell reports 20 (2), 491-504, 2017
1292017
Metagenomic exploration of antibiotic resistance in soil
JM Monier, S Demanèche, TO Delmont, A Mathieu, TM Vogel, P Simonet
Current opinion in microbiology 14 (3), 229-235, 2011
1272011
Metagenomic mining for microbiologists
TO Delmont, C Malandain, E Prestat, C Larose, JM Monier, P Simonet, ...
The ISME journal 5 (12), 1837-1843, 2011
1222011
Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
TO Delmont, M Gaia, DD Hinsinger, P Frémont, C Vanni, ...
Cell Genomics 2 (5), 2022
120*2022
Identifying contamination with advanced visualization and analysis practices: metagenomic approaches for eukaryotic genome assemblies
TO Delmont, AM Eren
PeerJ 4, e1839, 2016
992016
Phaeocystis antarctica blooms strongly influence bacterial community structures in the Amundsen Sea polynya
TO Delmont, KM Hammar, HW Ducklow, PL Yager, AF Post
Frontiers in microbiology 5, 108702, 2014
982014
Single-amino acid variants reveal evolutionary processes that shape the biogeography of a global SAR11 subclade
TO Delmont, E Kiefl, O Kilinc, OC Esen, I Uysal, MS Rappe, S Giovannoni, ...
Elife 8, e46497, 2019
932019
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