Raquel Linheiro
Raquel Linheiro
Research Associate in bioinformatics, The University of Manchester
Verified email at
Cited by
Cited by
The Drosophila melanogaster Genetic Reference Panel
TFC Mackay, S Richards, EA Stone, A Barbadilla, JF Ayroles, D Zhu, ...
Nature 482 (7384), 173-178, 2012
Population Genomics of the Wolbachia Endosymbiont in Drosophila melanogaster
MF Richardson, LA Weinert, JJ Welch, RS Linheiro, MM Magwire, ...
PLoS genetics 8 (12), e1003129, 2012
Whole genome resequencing reveals natural target site preferences of transposable elements in Drosophila melanogaster
RS Linheiro, CM Bergman
PloS one 7 (2), e30008, 2012
McClintock: an integrated pipeline for detecting transposable element insertions in whole-genome shotgun sequencing data
MG Nelson, RS Linheiro, CM Bergman
G3: Genes, Genomes, Genetics 7 (8), 2763-2778, 2017
Testing the palindromic target site model for DNA transposon insertion using the Drosophila melanogaster P-element
RS Linheiro, CM Bergman
Nucleic acids research 36 (19), 6199-6208, 2008
Genetic variation in the conjugative plasmidome of a hospital effluent multidrug resistant Escherichia coli strain
C Ferreira, D Bogas, SK Bikarolla, AR Varela, K Frykholm, R Linheiro, ...
Chemosphere 220, 748-759, 2019
The Silene latifolia genome and its giant Y chromosome
C Moraga, C Branco, Q Rougemont, P Veltsos, P Jedlicka, A Muyle, ...
bioRxiv, 2023.09. 21.558754, 2023
CStone: A de novo transcriptome assembler for short-read data that identifies non-chimeric contigs based on underlying graph structure
R Linheiro, J Archer
PLoS computational biology 17 (11), e1009631, 2021
Evaluation of a bacteriocinogenic Lactobacillus plantarum strain on the microbiological characteristics of “Alheira de Vitela”
A Macieira, H Albano, M Pinto, R Linheiro, J Barbosa, P Teixeira
AIMS Agriculture and Food 4 (2), 223-236, 2019
Quantification of the effects of chimerism on read mapping, differential expression and annotation following short-read de novo assembly.
R Linheiro, J Archer
F1000Research 11, 120, 2022
On taming the effect of transcript level intra-condition count variation during differential expression analysis: A story of dogs, foxes and wolves
D Lobo, R Linheiro, R Godinho, JP Archer
Plos one 17 (9), e0274591, 2022
CView: A network based tool for enhanced alignment visualization
R Linheiro, S Sabatino, D Lobo, J Archer
Plos one 17 (6), e0259726, 2022
Antimicrobial resistance profiles after conjugative events with an escherichia coli isolate from hospital effluent
C Ferreira, D Bogas, R Linheiro, AR Varela, OC Nunes, CM Manaia
7th Congress of European Microbiologists, 2017
Computational analysis of transposable element target site preferences in Drosophila melanogaster
RS Linheiro
PQDT-UK & Ireland, 2011
Promoter targeting preferences of the D. melanogaster P-element
RS Linheiro, CM Bergman
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