The human colon cancer methylome shows similar hypo-and hypermethylation at conserved tissue-specific CpG island shores RA Irizarry, C Ladd-Acosta, B Wen, Z Wu, C Montano, P Onyango, H Cui, ... Nature genetics 41 (2), 178-186, 2009 | 2477 | 2009 |
A model-based background adjustment for oligonucleotide expression arrays Z Wu, RA Irizarry, R Gentleman, F Martinez-Murillo, F Spencer Journal of the American statistical Association 99 (468), 909-917, 2004 | 2087 | 2004 |
Removing technical variability in RNA-seq data using conditional quantile normalization KD Hansen, RA Irizarry, Z Wu Biostatistics 13 (2), 204-216, 2012 | 686 | 2012 |
Preprocessing of oligonucleotide array data Z Wu, RA Irizarry Nature biotechnology 22 (6), 656-658, 2004 | 482 | 2004 |
A benchmark for Affymetrix GeneChip expression measures LM Cope, RA Irizarry, HA Jaffee, Z Wu, TP Speed Bioinformatics 20 (3), 323-331, 2004 | 428 | 2004 |
Comparison of Affymetrix GeneChip expression measures RA Irizarry, Z Wu, HA Jaffee Bioinformatics 22 (7), 789-794, 2006 | 410 | 2006 |
Stochastic models inspired by hybridization theory for short oligonucleotide arrays Z Wu, RA Irizarry Proceedings of the eighth annual international conference on Research in …, 2004 | 371 | 2004 |
The transcriptome and proteome of the diatom Thalassiosira pseudonana reveal a diverse phosphorus stress response ST Dyhrman, BD Jenkins, TA Rynearson, MA Saito, ML Mercier, ... PloS one 7 (3), e33768, 2012 | 352 | 2012 |
DNA hypomethylation arises later in prostate cancer progression than CpG island hypermethylation and contributes to metastatic tumor heterogeneity S Yegnasubramanian, MC Haffner, Y Zhang, B Gurel, TC Cornish, Z Wu, ... Cancer research 68 (21), 8954-8967, 2008 | 350 | 2008 |
A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data H Wu, C Wang, Z Wu Biostatistics 14 (2), 232-243, 2013 | 278 | 2013 |
Sequencing technology does not eliminate biological variability KD Hansen, Z Wu, RA Irizarry, JT Leek Nature biotechnology 29 (7), 572-573, 2011 | 240 | 2011 |
Alternative statistical parameter for high-throughput screening assay quality assessment Y Sui, Z Wu Journal of biomolecular screening 12 (2), 229-234, 2007 | 152 | 2007 |
Gold nanocage-photosensitizer conjugates for dual-modal image-guided enhanced photodynamic therapy A Srivatsan, SV Jenkins, M Jeon, Z Wu, C Kim, J Chen, RK Pandey Theranostics 4 (2), 163, 2014 | 140 | 2014 |
Anti-HIV activity in cervical-vaginal secretions from HIV-positive and-negative women correlate with innate antimicrobial levels and IgG antibodies M Ghosh, JV Fahey, Z Shen, T Lahey, S Cu-Uvin, Z Wu, K Mayer, ... PloS one 5 (6), e11366, 2010 | 138 | 2010 |
Targeting tumor-associated macrophages in an orthotopic murine model of diffuse malignant mesothelioma NR Miselis, ZJ Wu, N Van Rooijen, AB Kane Molecular cancer therapeutics 7 (4), 788-799, 2008 | 138 | 2008 |
Adipose tissue palmitoleic acid and obesity in humans: does it behave as a lipokine? J Gong, H Campos, S McGarvey, Z Wu, R Goldberg, A Baylin The American journal of clinical nutrition 93 (1), 186-191, 2011 | 113 | 2011 |
PROPER: comprehensive power evaluation for differential expression using RNA-seq H Wu, C Wang, Z Wu Bioinformatics 31 (2), 233-241, 2015 | 112 | 2015 |
Gcrma: background adjustment using sequence information J Wu, R Irizarry, J MacDonald, J Gentry R package version 2200, 3-10, 2012 | 101 | 2012 |
Use of mixture models in a microarray-based screening procedure for detecting differentially represented yeast mutants RA Irizarry, SL Ooi, Z Wu, JD Boeke Statistical applications in genetics and molecular biology 2 (1), 2003 | 97 | 2003 |
Genome-wide methylation analysis of human colon cancer reveals similar hypo-and hypermethylation at conserved tissue-specific CpG island shores RA Irizarry, C Ladd-Acosta, B Wen, Z Wu, C Montano, P Onyango, H Cui, ... Nature genetics 41 (2), 178, 2009 | 92 | 2009 |