Simon Moxon
Simon Moxon
Associate Professor of Bioinformatics, University of East Anglia
Verified email at - Homepage
Cited by
Cited by
The Pfam protein families database
A Bateman, L Coin, R Durbin, RD Finn, V Hollich, S Griffiths‐Jones, ...
Nucleic acids research 32 (suppl 1), D138-D141, 2004
Pfam: clans, web tools and services
RD Finn, J Mistry, B Schuster-Böckler, S Griffiths-Jones, V Hollich, ...
Nucleic acids research 34 (suppl_1), D247-D251, 2006
Rfam: annotating non-coding RNAs in complete genomes
S Griffiths-Jones, S Moxon, M Marshall, A Khanna, SR Eddy, A Bateman
Nucleic acids research 33 (suppl_1), D121-D124, 2005
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
Nature 487 (7405), 94-98, 2012
Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening
S Moxon, R Jing, G Szittya, F Schwach, RLR Pilcher, V Moulton, T Dalmay
Genome research 18 (10), 1602-1609, 2008
Identification of grapevine microRNAs and their targets using high‐throughput sequencing and degradome analysis
V Pantaleo, G Szittya, S Moxon, L Miozzi, V Moulton, T Dalmay, J Burgyan
The Plant Journal 62 (6), 960-976, 2010
The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets
MB Stocks, S Moxon, D Mapleson, HC Woolfenden, I Mohorianu, L Folkes, ...
Bioinformatics 28 (15), 2059-2061, 2012
A toolkit for analysing large-scale plant small RNA datasets
S Moxon, F Schwach, T Dalmay, D MacLean, DJ Studholme, V Moulton
Bioinformatics 24 (19), 2252-2253, 2008
High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families
G Szittya, S Moxon, DM Santos, R Jing, MPS Fevereiro, V Moulton, ...
BMC genomics 9, 1-9, 2008
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
Genome biology 18, 1-20, 2017
Profiling of short RNAs during fleshy fruit development reveals stage‐specific sRNAome expression patterns
I Mohorianu, F Schwach, R Jing, S Lopez‐Gomollon, S Moxon, G Szittya, ...
The Plant Journal 67 (2), 232-246, 2011
Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction
B Navarro, V Pantaleo, A Gisel, S Moxon, T Dalmay, G Bisztray, F Di Serio, ...
PLoS One 4 (11), e7686, 2009
Chromosomal-level assembly of the Asian seabass genome using long sequence reads and multi-layered scaffolding
S Vij, H Kuhl, IS Kuznetsova, A Komissarov, AA Yurchenko, ...
PLoS genetics 12 (4), e1005954, 2016
Structural and functional analysis of viral siRNAs
G Szittya, S Moxon, V Pantaleo, G Toth, RL Rusholme Pilcher, V Moulton, ...
PLoS pathogens 6 (4), e1000838, 2010
Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
FE Nicolas, S Moxon, JP de Haro, S Calo, IV Grigoriev, S Torres-Martínez, ...
Nucleic acids research 38 (16), 5535-5541, 2010
DSYB catalyses the key step of dimethylsulfoniopropionate biosynthesis in many phytoplankton
ARJ Curson, BT Williams, BJ Pinchbeck, LP Sims, AB Martínez, ...
Nature Microbiology 3 (4), 430-439, 2018
Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine
V Pantaleo, P Saldarelli, L Miozzi, A Giampetruzzi, A Gisel, S Moxon, ...
Virology 408 (1), 49-56, 2010
Identification of novel small RNAs in tomato (Solanum lycopersicum)
RLR Pilcher, S Moxon, N Pakseresht, V Moulton, K Manning, G Seymour, ...
Planta 226, 709-717, 2007
PAREsnip: a tool for rapid genome-wide discovery of small RNA/target interactions evidenced through degradome sequencing
L Folkes, S Moxon, HC Woolfenden, MB Stocks, G Szittya, T Dalmay, ...
Nucleic acids research 40 (13), e103-e103, 2012
The Pfam protein families database
M Marshall, S Moxon, EL Sonnhammer, DJ Studholme, C Yeats, SR Eddy
Nucleic Acids Res 30, 276-280, 2004
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