| The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution M Van De Guchte, S Penaud, C Grimaldi, V Barbe, K Bryson, P Nicolas, ... Proceedings of the National Academy of Sciences 103 (24), 9274-9279, 2006 | 498 | 2006 |
| The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K S Chaillou, MC Champomier-Vergès, M Cornet, AM Crutz-Le Coq, ... Nature biotechnology 23 (12), 1527-1533, 2005 | 476 | 2005 |
| Complete genome sequence of the fish pathogen Flavobacterium psychrophilum E Duchaud, M Boussaha, V Loux, JF Bernardet, C Michel, B Kerouault, ... Nature biotechnology 25 (7), 763-769, 2007 | 249 | 2007 |
| The Complete Genome of Propionibacterium freudenreichii CIRM-BIA1T, a Hardy Actinobacterium with Food and Probiotic Applications H Falentin, SM Deutsch, G Jan, V Loux, A Thierry, S Parayre, MB Maillard, ... PloS one 5 (7), e11748, 2010 | 232 | 2010 |
| Complete Genome Sequence of the Probiotic Lactobacillus casei Strain BL23 A Mazé, G Boël, M Zúniga, A Bourand, V Loux, MJ Yebra, V Monedero, ... Journal of bacteriology 192 (10), 2647-2648, 2010 | 179 | 2010 |
| Overview of a surface-ripened cheese community functioning by meta-omics analyses E Dugat-Bony, C Straub, A Teissandier, D Onésime, V Loux, C Monnet, ... PloS one 10 (4), e0124360, 2015 | 159 | 2015 |
| Mapping reads on a genomic sequence: an algorithmic overview and a practical comparative analysis S Schbath, V Martin, M Zytnicki, J Fayolle, V Loux, JF Gibrat Journal of Computational Biology 19 (6), 796-813, 2012 | 141 | 2012 |
| Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram‐positive bacteria A Barinov, V Loux, A Hammani, P Nicolas, P Langella, D Ehrlich, ... Proteomics 9 (1), 61-73, 2009 | 140 | 2009 |
| AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system K Bryson, V Loux, R Bossy, P Nicolas, S Chaillou, M Van De Guchte, ... Nucleic acids research 34 (12), 3533-3545, 2006 | 116 | 2006 |
| Bacterial protein signals are associated with Crohn’s disease C Juste, DP Kreil, C Beauvallet, A Guillot, S Vaca, C Carapito, S Mondot, ... Gut 63 (10), 1566-1577, 2014 | 115 | 2014 |
| The Arthrobacter arilaitensis Re117 Genome Sequence Reveals Its Genetic Adaptation to the Surface of Cheese C Monnet, V Loux, JF Gibrat, E Spinnler, V Barbe, B Vacherie, F Gavory, ... PloS one 5 (11), e15489, 2010 | 99 | 2010 |
| Surface proteins of Propionibacterium freudenreichii are involved in its anti-inflammatory properties C Le Maréchal, V Péton, C Plé, C Vroland, J Jardin, V Briard-Bion, ... Journal of proteomics 113, 447-461, 2015 | 98 | 2015 |
| Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products M Almeida, A Hébert, AL Abraham, S Rasmussen, C Monnet, N Pons, ... BMC genomics 15, 1-16, 2014 | 97 | 2014 |
| Deciphering intra-species bacterial diversity of meat and seafood spoilage microbiota using gyrB amplicon sequencing: A comparative analysis with 16S rDNA V3 … S Poirier, O Rué, R Peguilhan, G Coeuret, M Zagorec, ... PLoS One 13 (9), e0204629, 2018 | 96 | 2018 |
| Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action H El Kafsi, J Binesse, V Loux, J Buratti, S Boudebbouze, R Dervyn, ... BMC genomics 15, 1-12, 2014 | 82 | 2014 |
| Complete genome sequence of the fish pathogen Flavobacterium branchiophilum M Touchon, P Barbier, JF Bernardet, V Loux, B Vacherie, V Barbe, ... Applied and environmental microbiology 77 (21), 7656-7662, 2011 | 78 | 2011 |
| Inventory of the GH70 enzymes encoded by Leuconostoc citreum NRRL B‐1299 – identification of three novel α‐transglucosylases D Passerini, M Vuillemin, L Ufarté, S Morel, V Loux, C Fontagné‐Faucher, ... The FEBS Journal 282 (11), 2115-2130, 2015 | 76 | 2015 |
| New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration C Ambroset, C Coluzzi, G Guédon, MD Devignes, V Loux, T Lacroix, ... Frontiers in microbiology 6, 1483, 2016 | 75 | 2016 |
| The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition JK Cornuault, E Moncaut, V Loux, A Mathieu, H Sokol, MA Petit, ... The ISME journal 14 (3), 771-787, 2020 | 63 | 2020 |
| Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum E Duchaud, T Rochat, C Habib, P Barbier, V Loux, C Guérin, I Dalsgaard, ... Frontiers in microbiology 9, 138, 2018 | 57 | 2018 |
