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John Baines
John Baines
Professor, Kiel University
Verified email at iem.uni-kiel.de
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Cited by
Year
Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota
J Wang, LB Thingholm, J Skiecevičienė, P Rausch, M Kummen, JR Hov, ...
Nature genetics 48 (11), 1396-1406, 2016
6042016
Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family
I Lagkouvardos, TR Lesker, TCA Hitch, EJC Gálvez, N Smit, K Neuhaus, ...
Microbiome 7, 1-15, 2019
5132019
The Mouse Intestinal Bacterial Collection (miBC) provides host-specific insight into cultured diversity and functional potential of the gut microbiota
I Lagkouvardos, R Pukall, B Abt, BU Foesel, JP Meier-Kolthoff, N Kumar, ...
Nature microbiology 1 (10), 1-15, 2016
4342016
Getting the hologenome concept right: an eco-evolutionary framework for hosts and their microbiomes
KR Theis, NM Dheilly, JL Klassen, RM Brucker, JF Baines, TCG Bosch, ...
Msystems 1 (2), e00028-16, 2016
4082016
Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype
P Rausch, A Rehman, S Künzel, R Häsler, SJ Ott, S Schreiber, ...
Proceedings of the National Academy of Sciences 108 (47), 19030-19035, 2011
3972011
Nod2 is essential for temporal development of intestinal microbial communities
A Rehman, C Sina, O Gavrilova, R Häsler, S Ott, JF Baines, S Schreiber, ...
Gut 60 (10), 1354-1362, 2011
3842011
Distinct antimicrobial peptide expression determines host species-specific bacterial associations
S Franzenburg, J Walter, S Künzel, J Wang, JF Baines, TCG Bosch, ...
Proceedings of the National Academy of Sciences 110 (39), E3730-E3738, 2013
3272013
Gut microbiota in Parkinson disease in a northern German cohort
F Hopfner, A Künstner, SH Müller, S Künzel, KE Zeuner, NG Margraf, ...
Brain research 1667, 41-45, 2017
2952017
Lipocalin 2 protects from inflammation and tumorigenesis associated with gut microbiota alterations
AR Moschen, RR Gerner, J Wang, V Klepsch, TE Adolph, SJ Reider, ...
Cell host & microbe 19 (4), 455-469, 2016
2872016
Host species and environmental effects on bacterial communities associated with Drosophila in the laboratory and in the natural environment
F Staubach, JF Baines, S Künzel, EM Bik, DA Petrov
PloS one 8 (8), e70749, 2013
2412013
Extended analysis of a genome-wide association study in primary sclerosing cholangitis detects multiple novel risk loci
T Folseraas, E Melum, P Rausch, BD Juran, E Ellinghaus, A Shiryaev, ...
Journal of hepatology 57 (2), 366-375, 2012
2412012
Mucispirillum schaedleri antagonizes Salmonella virulence to protect mice against colitis
S Herp, S Brugiroux, D Garzetti, D Ring, LM Jochum, M Beutler, C Eberl, ...
Cell host & microbe 25 (5), 681-694. e8, 2019
2162019
Exceptionally high levels of recombination across the honey bee genome
M Beye, I Gattermeier, M Hasselmann, T Gempe, M Schioett, JF Baines, ...
Genome research 16 (11), 1339-1344, 2006
2142006
The role of biogeography in shaping diversity of the intestinal microbiota in house mice
M Linnenbrink, J Wang, EA Hardouin, S Künzel, D Metzler, JF Baines
Molecular ecology 22 (7), 1904-1916, 2013
2032013
Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice
J Wang, M Linnenbrink, S Künzel, R Fernandes, MJ Nadeau, ...
Proceedings of the National Academy of Sciences 111 (26), E2703-E2710, 2014
1962014
Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
P Rausch, M Rühlemann, BM Hermes, S Doms, T Dagan, K Dierking, ...
Microbiome 7, 1-19, 2019
1902019
MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers
S Franzenburg, S Fraune, S Künzel, JF Baines, T Domazet-Lošo, ...
Proceedings of the National Academy of Sciences 109 (47), 19374-19379, 2012
1812012
Geographical patterns of the standing and active human gut microbiome in health and IBD
A Rehman, P Rausch, J Wang, J Skieceviciene, G Kiudelis, K Bhagalia, ...
Gut 65 (2), 238-248, 2016
1802016
Functional variants in the sucrase–isomaltase gene associate with increased risk of irritable bowel syndrome
M Henström, L Diekmann, F Bonfiglio, F Hadizadeh, EM Kuech, ...
Gut 67 (2), 263-270, 2018
1732018
Analysis of factors contributing to variation in the C57BL/6J fecal microbiota across German animal facilities
P Rausch, M Basic, A Batra, SC Bischoff, M Blaut, T Clavel, J Gläsner, ...
International Journal of Medical Microbiology 306 (5), 343-355, 2016
1652016
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