Early transmission dynamics in Wuhan, China, of novel coronavirus–infected pneumonia Q Li, X Guan, P Wu, X Wang, L Zhou, Y Tong, R Ren, KSM Leung, ... New England journal of medicine 382 (13), 1199-1207, 2020 | 21829 | 2020 |
ggtree: an r package for visualization and annotation of phylogenetic trees with their covariates and other associated data G Yu, DK Smith, H Zhu, Y Guan, TTY Lam Methods in Ecology and Evolution 8 (1), 28-36, 2017 | 3750 | 2017 |
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins TTY Lam, N Jia, YW Zhang, MHH Shum, JF Jiang, HC Zhu, YG Tong, ... Nature 583 (7815), 282-285, 2020 | 2249 | 2020 |
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen) A Rambaut, TT Lam, L Max Carvalho, OG Pybus Virus evolution 2 (1), vew007, 2016 | 1868 | 2016 |
The sequence and de novo assembly of the giant panda genome R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ... Nature 463 (7279), 311-317, 2010 | 1398 | 2010 |
Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic MF Boni, P Lemey, X Jiang, TTY Lam, BW Perry, TA Castoe, A Rambaut, ... Nature microbiology 5 (11), 1408-1417, 2020 | 1102 | 2020 |
Early transmissibility assessment of the N501Y mutant strains of SARS-CoV-2 in the United Kingdom, October to November 2020 K Leung, MHH Shum, GM Leung, TTY Lam, JT Wu Eurosurveillance 26 (1), 2002106, 2021 | 784 | 2021 |
Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree G Yu, TTY Lam, H Zhu, Y Guan Molecular biology and evolution 35 (12), 3041-3043, 2018 | 598 | 2018 |
The genesis and source of the H7N9 influenza viruses causing human infections in China TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ... Nature 502 (7470), 241-244, 2013 | 528 | 2013 |
Co-circulation of three camel coronavirus species and recombination of MERS-CoVs in Saudi Arabia JSM Sabir, TTY Lam, MMM Ahmed, L Li, Y Shen, S EM Abo-Aba, ... Science 351 (6268), 81-84, 2016 | 474 | 2016 |
Treeio: An R Package for Phylogenetic Tree Input and Output with Richly Annotated and Associated Data LG Wang, TTY Lam, S Xu, Z Dai, L Zhou, T Feng, P Guo, CW Dunn, ... Molecular biology and evolution 37 (2), 599-603, 2020 | 447 | 2020 |
Phylogeny-based evolutionary, demographical, and geographical dissection of North American type 2 porcine reproductive and respiratory syndrome viruses M Shi, TTY Lam, CC Hon, MP Murtaugh, PR Davies, RKH Hui, J Li, ... Journal of virology 84 (17), 8700-8711, 2010 | 437 | 2010 |
Molecular epidemiology of PRRSV: a phylogenetic perspective M Shi, TTY Lam, CC Hon, RKH Hui, KS Faaberg, T Wennblom, ... Virus research 154 (1-2), 7-17, 2010 | 436 | 2010 |
The ever-expanding diversity of porcine reproductive and respiratory syndrome virus MP Murtaugh, T Stadejek, JE Abrahante, TTY Lam, FCC Leung Virus research 154 (1-2), 18-30, 2010 | 381 | 2010 |
Molecular characterization of the fecal microbiota in patients with nonalcoholic steatohepatitis–a longitudinal study VWS Wong, CH Tse, TTY Lam, GLH Wong, AML Chim, WCW Chu, ... PloS one 8 (4), e62885, 2013 | 370 | 2013 |
Evolutionary genetics of human enterovirus 71: origin, population dynamics, natural selection, and seasonal periodicity of the VP1 gene KK Tee, TTY Lam, YF Chan, JM Bible, A Kamarulzaman, CYW Tong, ... Journal of virology 84 (7), 3339-3350, 2010 | 286 | 2010 |
Identification of 2019-nCoV related coronaviruses in Malayan pangolins in southern China TTY Lam, MHH Shum, HC Zhu, YG Tong, XB Ni, YS Liao, W Wei, ... BioRxiv, 2020.02. 13.945485, 2020 | 285 | 2020 |
Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus CC Hon, TY Lam, ZL Shi, AJ Drummond, CW Yip, F Zeng, PY Lam, ... Journal of virology 82 (4), 1819-1826, 2008 | 248 | 2008 |
The rapidly expanding CRF01_AE epidemic in China is driven by multiple lineages of HIV-1 viruses introduced in the 1990s Y Feng, X He, JH Hsi, F Li, X Li, Q Wang, Y Ruan, H Xing, TTY Lam, ... Aids 27 (11), 1793-1802, 2013 | 241 | 2013 |
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen). Virus Evol 2: vew007 A Rambaut, TT Lam, L Max Carvalho, OG Pybus | 239 | 2016 |