Alexander van Oudenaarden
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Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
AM Khalil, M Guttman, M Huarte, M Garber, A Raj, D Rivea Morales, ...
Proceedings of the National Academy of Sciences 106 (28), 11667-11672, 2009
Nature, nurture, or chance: stochastic gene expression and its consequences
A Raj, A Van Oudenaarden
Cell 135 (2), 216-226, 2008
Imaging individual mRNA molecules using multiple singly labeled probes
A Raj, P Van Den Bogaard, SA Rifkin, A Van Oudenaarden, S Tyagi
Nature methods 5 (10), 877, 2008
Prospective derivation of a living organoid biobank of colorectal cancer patients
M Van de Wetering, HE Francies, JM Francis, G Bounova, F Iorio, A Pronk, ...
Cell 161 (4), 933-945, 2015
The human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
elife 6, e27041, 2017
Regulation of noise in the expression of a single gene
EM Ozbudak, M Thattai, I Kurtser, AD Grossman, A Van Oudenaarden
Nature genetics 31 (1), 69-73, 2002
Intrinsic noise in gene regulatory networks
M Thattai, A Van Oudenaarden
Proceedings of the National Academy of Sciences 98 (15), 8614-8619, 2001
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337-341, 2009
Single-cell messenger RNA sequencing reveals rare intestinal cell types
D Grün, A Lyubimova, L Kester, K Wiebrands, O Basak, N Sasaki, ...
Nature 525 (7568), 251-255, 2015
Direct cell reprogramming is a stochastic process amenable to acceleration
J Hanna, K Saha, B Pando, J Van Zon, CJ Lengner, MP Creyghton, ...
Nature 462 (7273), 595-601, 2009
Multistability in the lactose utilization network of Escherichia coli
EM Ozbudak, M Thattai, HN Lim, BI Shraiman, A Van Oudenaarden
Nature 427 (6976), 737-740, 2004
Cellular decision making and biological noise: from microbes to mammals
G Balázsi, A Van Oudenaarden, JJ Collins
Cell 144 (6), 910-925, 2011
A single-cell transcriptome atlas of the human pancreas
MJ Muraro, G Dharmadhikari, D Grün, N Groen, T Dielen, E Jansen, ...
Cell systems 3 (4), 385-394. e3, 2016
Slug and Sox9 cooperatively determine the mammary stem cell state
W Guo, Z Keckesova, JL Donaher, T Shibue, V Tischler, F Reinhardt, ...
Cell 148 (5), 1015-1028, 2012
Stochastic switching as a survival strategy in fluctuating environments
M Acar, JT Mettetal, A Van Oudenaarden
Nature genetics 40 (4), 471-475, 2008
Noise propagation in gene networks
JM Pedraza, A van Oudenaarden
Science 307 (5717), 1965-1969, 2005
Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase
Y Buganim, DA Faddah, AW Cheng, E Itskovich, S Markoulaki, K Ganz, ...
Cell 150 (6), 1209-1222, 2012
MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals
J Tsang, J Zhu, A van Oudenaarden
Molecular cell 26 (5), 753-767, 2007
Using gene expression noise to understand gene regulation
B Munsky, G Neuert, A Van Oudenaarden
Science 336 (6078), 183-187, 2012
Dll1+ secretory progenitor cells revert to stem cells upon crypt damage
JH Van Es, T Sato, M Van De Wetering, A Lyubimova, AN Yee Nee, ...
Nature cell biology 14 (10), 1099-1104, 2012
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