Broňa Brejová
Broňa Brejová
Dept. of Computer Science, Comenius University in Bratislava, Slovakia
Verified email at - Homepage
Cited by
Cited by
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
The Schistosoma japonicum genome reveals features of host–parasite interplay
Functional genomics analysis Liu Feng 1 2 Hu Wei 7 Wang Zhi-Qin 1 Zhang Qin ...
Nature 460 (7253), 345-351, 2009
The genome of the hydatid tapeworm Echinococcus granulosus
H Zheng, W Zhang, L Zhang, Z Zhang, J Li, G Lu, Y Zhu, Y Wang, ...
Nature genetics 45 (10), 1168-1175, 2013
DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads
V Boža, B Brejová, T Vinař
PloS one 12 (6), e0178751, 2017
The common marmoset genome provides insight into primate biology and evolution
TMG Sequencing, Analysis Consortium
Nature genetics 46 (8), 850, 2014
The completion of the mammalian gene collection (MGC)
G Temple, DS Gerhard, R Rasooly, EA Feingold, PJ Good, C Robinson, ...
Genome research 19 (12), 2324-2333, 2009
Evolution of linear chromosomes and multipartite genomes in yeast mitochondria
M Valach, Z Farkas, D Fricova, J Kovac, B Brejova, T Vinar, I Pfeiffer, ...
Nucleic acids research 39 (10), 4202-4219, 2011
Optimal spaced seeds for homologous coding regions
B Brejová, DG Brown, T Vinař
Journal of Bioinformatics and Computational Biology 1 (04), 595-610, 2004
Vector seeds: An extension to spaced seeds
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 70 (3), 364-380, 2005
Finding patterns in biological sequences
B Brejová, C DiMarco, T Vinar, SR Hidalgo, G Holguin, C Patten
Unpublished project report for CS798G, University of Waterloo, Fall, 2000
ExonHunter: a comprehensive approach to gene finding
B Brejová, DG Brown, M Li, T Vinař
Bioinformatics 21 (suppl_1), i57-i65, 2005
Massive programmed translational jumping in mitochondria
BF Lang, M Jakubkova, E Hegedusova, R Daoud, L Forget, B Brejova, ...
Proceedings of the National Academy of Sciences 111 (16), 5926-5931, 2014
Targeted discovery of novel human exons by comparative genomics
A Siepel, M Diekhans, B Brejová, L Langton, M Stevens, CLG Comstock, ...
Genome research 17 (12), 1763-1773, 2007
Vector seeds: an extension to spaced seeds allows substantial improvements in sensitivity and specificity
B Brejová, DG Brown, T Vinař
Algorithms in Bioinformatics: Third International Workshop, WABI 2003 …, 2003
Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution
S Zhu, YZ Cao, C Jiang, BY Tan, Z Wang, S Feng, L Zhang, XH Su, ...
BMC genomics 13, 1-10, 2012
Optimal arrangement of leaves in the tree representing hierarchical clustering of gene expression data
T Biedl, B Brejová, ED Demaine, AM Hamel, T Vinar
University of Waterloo, Canada, 2001
A draft genome sequence of the elusive giant squid, Architeuthis dux
RR Da Fonseca, A Couto, AM Machado, B Brejova, CB Albertin, F Silva, ...
GigaScience 9 (1), giz152, 2020
On-line Viterbi algorithm for analysis of long biological sequences
R Šrámek, B Brejová, T Vinař
Algorithms in Bioinformatics: 7th International Workshop, WABI 2007 …, 2007
Optimal spaced seeds for Hidden Markov Models, with application to homologous coding regions
B Brejová, DG Brown, T Vinař
Annual Symposium on Combinatorial Pattern Matching, 42-54, 2003
The most probable annotation problem in HMMs and its application to bioinformatics
B Brejová, DG Brown, T Vinař
Journal of Computer and System Sciences 73 (7), 1060-1077, 2007
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