Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021 | 2005 | 2021 |
The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 1049 | 2014 |
Dsuite-fast D-statistics and related admixture evidence from VCF files M Malinsky, M Matschiner, H Svardal Molecular Ecology Resources 21 (2), 584-595, 2021 | 597 | 2021 |
Whole-genome sequences of Malawi cichlids reveal multiple radiations interconnected by gene flow M Malinsky, H Svardal, AM Tyers, EA Miska, MJ Genner, GF Turner, ... Nature ecology & evolution 2 (12), 1940-1955, 2018 | 469 | 2018 |
Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake M Malinsky, RJ Challis, AM Tyers, S Schiffels, Y Terai, BP Ngatunga, ... Science 350 (6267), 1493--1498, 2015 | 406 | 2015 |
RADpainter and fineRADstructure: Population Inference from RADseq Data M Malinsky, E Trucchi, DJ Lawson, D Falush Molecular biology and evolution 35 (5), 1284-1290, 2018 | 358 | 2018 |
Drivers and dynamics of a massive adaptive radiation in cichlid fishes F Ronco, M Matschiner, A Böhne, A Boila, HH Büscher, A El Taher, ... Nature 589 (7840), 76-81, 2021 | 252 | 2021 |
Ancestral hybridization facilitated species diversification in the Lake Malawi cichlid fish adaptive radiation H Svardal, FX Quah, M Malinsky, BP Ngatunga, EA Miska, W Salzburger, ... Molecular biology and evolution 37 (4), 1100-1113, 2020 | 119 | 2020 |
Genetic Variation and Hybridization in Evolutionary Radiations of Cichlid Fishes H Svardal, W Salzburger, M Malinsky Annual Review of Animal Biosciences 9 (1), 55-79, 2021 | 48 | 2021 |
Movement of transposable elements contributes to cichlid diversity KL Carleton, M Conte, M Malinsky, SP Nandamuri, BA Sandkam, JI Meier, ... Molecular Ecology 29 (24), 4956-4969, 2020 | 26 | 2020 |
Epigenetic divergence during early stages of speciation in an African crater lake cichlid fish G Vernaz, AG Hudson, ME Santos, B Fischer, M Carruthers, ... Nature ecology & evolution 6 (12), 1940-1951, 2022 | 25 | 2022 |
Mapping Epigenetic Divergence in the Massive Radiation of Lake Malawi Cichlid Fishes G Vernaz, M Malinsky, H Svardal, M Du, AM Tyers, ME Santos, R Durbin, ... Nature Communications 12 (5870), 2021 | 24 | 2021 |
Environmental context for understanding the iconic adaptive radiation of cichlid fishes in Lake Malawi M Malinsky, W Salzburger Proceedings of the National Academy of Sciences 113 (42), 11654-11656, 2016 | 24 | 2016 |
Whole genome resequencing data enables a targeted SNP panel for conservation and aquaculture of Oreochromis cichlid fishes A Ciezarek, A Ford, G Etherington, K Nasser, M Malinsky, T Mehta, ... Aquaculture 548, 2022 | 20 | 2022 |
trio-sga: facilitating de novo assembly of highly heterozygous genomes with parent-child trios M Malinsky, JT Simpson, R Durbin bioRxiv, 051516, 2016 | 12 | 2016 |
The genetics of niche-specific behavioral tendencies in an adaptive radiation of cichlid fishes C Sommer-Trembo, ME Santos, B Clark, M Werner, A Fages, ... Science 384 (6694), 470-475, 2024 | 10 | 2024 |
Genome‐wide phylogeography reveals cryptic speciation in the circumglobal planktonic calcifier Limacina bulimoides LQ Choo, G Spagliardi, M Malinsky, M Choquet, E Goetze, G Hoarau, ... Molecular ecology 32 (12), 3200-3219, 2023 | 7 | 2023 |
Genome-enabled discovery of evolutionary divergence in brains and behavior C Patil, J Sylvester, K Abdilleh, MW Norsworthy, K Pottin, M Malinsky, ... Scientific Reports 11 (13016), 2021 | 6 | 2021 |
Introgression dynamics of sex-linked chromosomal inversions shape the Malawi cichlid adaptive radiation LM Blumer, V Burskaia, I Artiushin, J Saha, J Camacho Garcia, J Elkin, ... bioRxiv, 2024.07. 28.605452, 2024 | 4 | 2024 |
Towards reliable detection of introgression in the presence of among-species rate variation T Koppetsch, M Malinsky, M Matschiner Systematic Biology, syae028, 2024 | 3* | 2024 |